Escherichia coli FC853_EC |
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Putative Escherichia coli FC853_EC RM systems
Ref: Anandan,S. et al. unpublished
REBASE ref # 28855
| Sequence length: | GenBank #: | |
| Chromosome: | 5,209,476 bp | CP040919 |
| plasmid p853EC1: | 97,266 bp | CP040920 |
| plasmid p853EC2: | 49,465 bp | CP040921 |
| plasmid p853EC3: | 143,714 bp | CP040922 |
REBASE acronym: Eco853
Org_num: 34902
All begin FH485_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9805 | IS3 family transposase | |||
| 9810 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco853ORF9810P |
| 9815 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco853ORF9810P |
| 9820 | YecA family protein | |||
| 9825 | cold shock domain-containing protein | |||
| 9830 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco853ORF9810P |
| 9835 | M48 family metallopeptidase | |||
| 20620 | restriction endonuclease | |||
| 20625 | R | Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | Eco853ORF20630P |
| 20630 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco853ORF20630P |
| 20635 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco853ORF20630P |
| 20640 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1110 | cell division protein DamX | |||
| 1115 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco853DamP |
| 1120 | ribulose-phosphate 3-epimerase | |||
| 1645 | DUF2556 domain-containing protein | |||
| 1650 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco853ORF1650P |
| 1655 | DNA-binding transcriptional regulator Fis | |||
| 6100 | 82 aa hypothetical protein | |||
| 6105 | M | M.SspPIBORF6330P (99% identity) | M.Eco853ORF6105P | |
| 6110 | PerC family transcriptional regulator | |||
| 9535 | phosphohydrolase | |||
| 9540 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco853DcmP |
| 9545 | V | V.Ecos142DcmP (100% identity) | V.Eco853DcmP | |
| 9550 | drug/metabolite exporter YedA | |||
| 13305 | 108 aa hypothetical protein | |||
| 13320 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco853ORF13320P |
| 13325 | TrmB family transcriptional regulator | |||
| 15755 | replication endonuclease | |||
| 15760 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco853ORF15760P |
| 15765 | TraR/DksA family transcriptional regulator | |||
| 22595 | LexA family transcriptional regulator | |||
| 22600 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Eco853ORF22600P |
| 22605 | PerC family transcriptional regulator | |||
| plasmid p853EC1 | ||||
| 25610 | 61 aa hypothetical protein | |||
| 25625 | M | M.Eco0068ORF25605P (100% identity) | M.Eco853ORF25625P | |
| 25630 | recombination-associated protein RdgC | |||
| plasmid p853EC2 | ||||
| 26285 | 89 aa hypothetical protein | |||
| 26290 | M | M.EcoNDM5ORFCP (100% identity) | M.Eco853ORF26290P | |
| 26300 | 92 aa hypothetical protein | |||
| plasmid p853EC3 | ||||
| 27460 | 0 aa hypothetical protein | |||
| 27465 | M | 67 aa hypothetical protein | M.Eco853ORF27465P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p853EC1 | ||||
| 25920 | modulator protein | |||
| 25925 | M | M.Sen68045ORF16165P (99% identity) | AGACC | M.Eco853ORF25925P |
| 25930 | R | Sen63ORFKP (100% identity) | AGACC | Eco853ORF25925P |
| 25935 | maturation control protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20615 | GTPase | |||
| 20620 | R | Ssp28760MrrP (100% identity) | Eco853MrrP | |
| 20625 | type I restriction-modification system | |||
| 20640 | endoribonuclease SymE | |||
| 20645 | R | SenHNK130McrBP (100% identity) | Eco853McrBP | |
| 20650 | R | SenHNK130McrCP (100% identity) | Eco853McrCP | |