Salmonella enterica subsp. enterica serovar Typhimurium SAP18-6199 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SAP18-6199 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 29010
| Sequence length: | GenBank #: | |
| Chromosome: | 4,813,658 bp | CP040900 |
| plasmid pCFSAN074387: | 93,930 bp | CP040901 |
REBASE acronym: Sen6199
Org_num: 35664
All begin FF984_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20180 | restriction endonuclease | |||
| 20185 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen6199ORF20190P |
| 20190 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen6199ORF20190P |
| 20195 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen6199ORF20190P |
| 20200 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1830 | cell division protein DamX | |||
| 1835 | M | M.StyTDamP (100% identity) | GATC | M.Sen6199DamP |
| 1840 | ribulose-phosphate 3-epimerase | |||
| 2320 | DUF2556 domain-containing protein | |||
| 2325 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen6199ORF2325P |
| 2330 | DNA-binding transcriptional regulator Fis | |||
| 5890 | ead/Ea22-like family protein | |||
| 5895 | M | M.Sens29958ORF6205P (100% identity) | M.Sen6199ORF5895P | |
| 5900 | DUF550 domain-containing protein | |||
| 9270 | PerC family transcriptional regulator | |||
| 9275 | M | M.Ssp89ORF1824P (100% identity) | M.Sen6199ORF9275P | |
| 9280 | RusA family crossover junction | |||
| 9510 | phosphohydrolase | |||
| 9515 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen6199DcmP |
| 9520 | V | V.StyUK1DcmP (100% identity) | V.Sen6199DcmP | |
| 9525 | drug/metabolite exporter YedA | |||
| 20340 | BREX system P-loop protein BrxC | |||
| 20345 | RM | StyUK1IV (100% identity) | GATCAG | Sen6199ORF20345P |
| 20350 | ATP-binding protein | |||
| plasmid pCFSAN074387 | ||||
| 23915 | 62 aa hypothetical protein | |||
| 23920 | M | M.StyUK1ORFAP (100% identity) | M.Sen6199ORF23920P | |
| 23925 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17615 | 33 aa hypothetical protein | |||
| 17620 | R | StyUK1IP (99% identity) | CAGAG | Sen6199ORF17625P |
| 17625 | M | M.Sens29958ORF17880P (100% identity) | CAGAG | M.Sen6199ORF17625P |
| 17630 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20175 | BrnT family toxin | |||
| 20180 | R | StyUK1MrrP (100% identity) | Sen6199MrrP | |
| 20185 | type I restriction-modification system | |||