Helicobacter pylori 19-A-EK3 |
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Putative Helicobacter pylori 19-A-EK3 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,706,376 bp
GenBank #: CP032911
REBASE acronym: Hpy19A
Org_num: 34972
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.Hpy19CORFVP (100% identity) | S.Hpy19AORFWP | |
| ??? | R | Hpy19CORFTP (100% identity) | Hpy19AORFUP | |
| ??? | S | S.Hpy19CORFTP (100% identity) | S.Hpy19AORFUP | |
| ??? | M | type I restriction-modification system subunit M | M.Hpy19AORFUBP | |
| ??? | M | M.Hpy19CORFTAP (100% identity) | M.Hpy19AORFUAP | |
| ??? | DNA cytosine methyltransferase | |||
| ??? | R | Hpy19CORFEP (100% identity) | CCANNNNNNTC | Hpy19AORFQP |
| ??? | M | M.Hpy19CORFEP (99% identity) | CCANNNNNNTC | M.Hpy19AORFQP |
| ??? | S | S.Hpy19CORFEP (100% identity) | CCANNNNNNTC | S.Hpy19AORFQP |
| ??? | R | Hpy19CORFKP (100% identity) | Hpy19AORFJP | |
| ??? | M | M.Hpy19CORFKP (100% identity) | M.Hpy19AORFJP | |
| ??? | S | S.Hpy19CORFKP (100% identity) | S.Hpy19AORFJP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | Hpy19CORFB1P (100% identity) | Hpy19AORFC1P | |
| ??? | R | Hpy19CORFAP (100% identity) | Hpy19AORFAP | |
| ??? | RM | Hpy19CORFZP (100% identity) | Hpy19AORFA1P | |
| ??? | S | S1.Hpy19CORFZP (100% identity) | S1.Hpy19AORFA1P | |
| ??? | S | S2.Hpy19CORFZP (100% identity) | S2.Hpy19AORFA1P | |
| ??? | R | Hpy19CORFYP (95% identity) | CATG | Hpy19AORFZP |
| ??? | M | M.Hpy19CORFYP (100% identity) | CATG | M.Hpy19AORFZP |
| ??? | M | M.Hpy19CORFBP (100% identity) | M.Hpy19AORFBP | |
| ??? | R | Hpy19CORFXP (100% identity) | TCNNGA | Hpy19AORFYP |
| ??? | M | M.Hpy19CORFXP (100% identity) | TCNNGA | M.Hpy19AORFYP |
| ??? | M | M.Hpy19CORFCP (100% identity) | GTNNAC | M.Hpy19AORFCP |
| ??? | R | Hpy19CORFCP (99% identity) | GTNNAC | Hpy19AORFCP |
| ??? | RM | Hpy19CORFWP (100% identity) | Hpy19AORFXP | |
| ??? | R | Hpy19CORFDP (100% identity) | GTAC | Hpy19AORFDP |
| ??? | M | M.Hpy19CORFDP (100% identity) | GTAC | M.Hpy19AORFDP |
| ??? | type I restriction-modification system subunit M | |||
| ??? | M | M.HpyR09ORF4225P (100% identity) | M.Hpy19AORFVP | |
| ??? | R | Hpy19CORFUP (100% identity) | Hpy19AORFVP | |
| ??? | R | Hpy19CORFQP (100% identity) | Hpy19AORFRP | |
| ??? | M | M.Hpy19CORFQP (100% identity) | M.Hpy19AORFRP | |
| ??? | GIY-YIG nuclease family protein | |||
| ??? | DNA cytosine methyltransferase | |||
| ??? | R | Hpy75ORF2360P (100% identity) | ACNGT | Hpy19AORFSP |
| ??? | M | M.HpyLI26II (100% identity) | ACNGT | M.Hpy19AORFSP |
| ??? | modification methylase VspI domain protein | |||
| ??? | DNA adenine methylase | |||
| ??? | M | M.Hpy19CORFSP (100% identity) | ATTAAT | M.Hpy19AORFTP |
| ??? | M | M.Hpy19CORFFP (100% identity) | CCGG | M.Hpy19AORFEP |
| ??? | R | 184 aa hypothetical protein HMPREF1415_00409 | CCGG | Hpy19AORFEP |
| ??? | DNA -methyltransferase | |||
| ??? | 184 aa hypothetical protein HMPREF1415_00409 | |||
| ??? | M | M.Hpy19CORFGP (100% identity) | TCGA | M.Hpy19AORFFP |
| ??? | M | M.Hpy19CORFHP (100% identity) | GATC | M.Hpy19AORFGP |
| ??? | R | Hpy19CORFHP (100% identity) | GATC | Hpy19AORFGP |
| ??? | M | M2.Hpy19CORFOP (100% identity) | M2.Hpy19AORFOP | |
| ??? | M | M1.Hpy19CORFOP (100% identity) | CCTC | M1.Hpy19AORFOP |
| ??? | 297 aa hypothetical protein | |||
| ??? | DNA methyltransferase | |||
| ??? | R | Hpy19CORFPP (100% identity) | GANTC | Hpy19AORFPP |
| ??? | M | M.Hpy19CORFPP (100% identity) | GANTC | M.Hpy19AORFPP |
| ??? | R | Hpy19CORFMP (100% identity) | GAAGA | Hpy19AORFMP |
| ??? | M | M1.Hpy19CORFMP (100% identity) | GAAGA | M1.Hpy19AORFMP |
| ??? | M | M2.Hpyfe83ORF6950P (95% identity) | GAAGA | M2.Hpy19AORFMP |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | adenosine deaminase | |||
| ??? | M | site-specific DNA-methyltransferase | M.Hpy19AORFLP | |
| ??? | M | adenosine deaminase | M.Hpy19AORFKP | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | Hpy19CORFJP (100% identity) | TGCA | Hpy19AORFIP |
| ??? | M | M.Hpy19CORFJP (100% identity) | TGCA | M.Hpy19AORFIP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy19CORFA1P (100% identity) | M.Hpy19AORFB1P | |
| ??? | R | Hpy19CORFA1P (100% identity) | Hpy19AORFB1P | |
| ??? | DUF1887 family protein | |||
| ??? | M | M.Hpy19CORFNP (100% identity) | M.Hpy19AORFNP | |
| ??? | R | Hpy19CORFNP (100% identity) | Hpy19AORFNP | |
| ??? | M | M.Hpy19CORFIP (100% identity) | M.Hpy19AORFHP | |
| ??? | R | Hpy19CORFIP (98% identity) | Hpy19AORFHP | |