Helicobacter pylori 21-A-EK1 |
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Putative Helicobacter pylori 21-A-EK1 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,582,133 bp
GenBank #: CP032909
REBASE acronym: Hpy21A
Org_num: 34975
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.Hpy21FORFXP (100% identity) | S.Hpy21AORFYP | |
| ??? | M | M.Hpy21FORFDP (100% identity) | M.Hpy21AORFDP | |
| ??? | S | S.Hpy21FORFDP (100% identity) | S.Hpy21AORFDP | |
| ??? | R | Hpy21FORFDP (100% identity) | Hpy21AORFDP | |
| ??? | R | HpyJ001ORF2280P (90% identity) | Hpy21AORFGP | |
| ??? | M | M.Hpy21FORFQP (100% identity) | M.Hpy21AORFGP | |
| ??? | S | S.Hpy21FORFQP (100% identity) | S.Hpy21AORFGP | |
| ??? | R | Hpy21FORFLP (100% identity) | Hpy21AORFMP | |
| ??? | M | M.Hpy21FORFLP (100% identity) | M.Hpy21AORFMP | |
| ??? | S | S.Hpy21FORFLP (100% identity) | S.Hpy21AORFMP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | DEAD/DEAH box helicase | |||
| ??? | RM | Hpy21FORFZP (100% identity) | Hpy21AORFA1P | |
| ??? | RM | Hpy21FORFAP (100% identity) | Hpy21AORFAP | |
| ??? | S | S.Hpy21FORFAP (100% identity) | S.Hpy21AORFAP | |
| ??? | R | Hpy280AORFUP (91% identity) | CATG | Hpy21AORFXP |
| ??? | M | M.Hpy21FORFWP (100% identity) | CATG | M.Hpy21AORFXP |
| ??? | M | M.Hpy21FORFBP (100% identity) | GCGC | M.Hpy21AORFBP |
| ??? | R | Hpy21FORFVP (100% identity) | Hpy21AORFWP | |
| ??? | M | M.Hpy21FORFVP (100% identity) | M.Hpy21AORFWP | |
| ??? | M | M.Hpy21FORFCP (100% identity) | GTNNAC | M.Hpy21AORFCP |
| ??? | R | Hpy21FORFCP (100% identity) | GTNNAC | Hpy21AORFCP |
| ??? | RM | Hpy21FORFEP (100% identity) | Hpy21AORFEP | |
| ??? | R | Hpy21FORFFP (100% identity) | GTAC | Hpy21AORFFP |
| ??? | M | M.Hpy21FORFFP (100% identity) | GTAC | M.Hpy21AORFFP |
| ??? | M | M.Hpy21FORFRP (100% identity) | M.Hpy21AORFTP | |
| ??? | GIY-YIG nuclease family protein | |||
| ??? | DNA cytosine methyltransferase | |||
| ??? | R | Hpy21FORFSP (100% identity) | ACNGT | Hpy21AORFUP |
| ??? | M | M.Hpy21FORFSP (100% identity) | ACNGT | M.Hpy21AORFUP |
| ??? | modification methylase VspI domain protein | |||
| ??? | DNA adenine methylase | |||
| ??? | M | M.Hpy21FORFTP (99% identity) | ATTAAT | M.Hpy21AORFVP |
| ??? | M | M.HpySP11III (100% identity) | CCGG | M.Hpy21AORFHP |
| ??? | R | Hpy21FORFGP (100% identity) | CCGG | Hpy21AORFHP |
| ??? | M | M.Hpy21FORFHP (99% identity) | GATC | M.Hpy21AORFIP |
| ??? | R | Hpy21FORFNP (100% identity) | GTSAC | Hpy21AORFPP |
| ??? | M | M.Hpy21FORFNP (100% identity) | GTSAC | M.Hpy21AORFPP |
| ??? | hypothetical protein | |||
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | hypothetical protein | CCTC | Hpy21AORFQP |
| ??? | DNA methyltransferase | |||
| ??? | M | DNA methyltransferase | CCTC | M2.Hpy21AORFQP |
| ??? | 107 aa hypothetical protein BB437_07770 | |||
| ??? | DNA methyltransferase | |||
| ??? | M | M.HpyB128KORFAP (97% identity) | M.Hpy21AORFRP | |
| ??? | DNA methyltransferase | |||
| ??? | 107 aa hypothetical protein BB437_07770 | |||
| ??? | RM | Hpy21FORFPP (95% identity) | Hpy21AORFSP | |
| ??? | adenosine deaminase | |||
| ??? | M | site-specific DNA-methyltransferase | M.Hpy21AORFOP | |
| ??? | M | M.Hpy21FORFMP (100% identity) | M.Hpy21AORFNP | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | Hpy21FORFKP (100% identity) | TGCA | Hpy21AORFLP |
| ??? | M | M.Hpy21FORFKP (100% identity) | TGCA | M.Hpy21AORFLP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy21FORFYP (99% identity) | M.Hpy21AORFZP | |
| ??? | R | Hpy21FORFYP (100% identity) | Hpy21AORFZP | |
| ??? | class I SAM-dependent DNA methyltransferase | |||
| ??? | M | M.Hpy21FORFIP (100% identity) | M.Hpy21AORFJP | |
| ??? | R | Hpy21FORFIP (100% identity) | Hpy21AORFJP | |
| ??? | M | M.Hpy21FORFJP (100% identity) | M.Hpy21AORFKP | |
| ??? | R | Hpy21FORFJP (100% identity) | Hpy21AORFKP | |