Helicobacter pylori 23-A-EK1 |
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Putative Helicobacter pylori 23-A-EK1 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,679,162 bp
GenBank #: CP032908
REBASE acronym: Hpy23A
Org_num: 34977
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyGE1ORF400P (95% identity) | S.Hpy23AORFD1P | |
| ??? | M | M.HpyGRE022ORF7665P (96% identity) | M.Hpy23AORFD1P | |
| ??? | R | HpyKG1ORF7470P (95% identity) | Hpy23AORFD1P | |
| ??? | S | S.HpyC124ORF2175P (99% identity) | S.Hpy23AORFA1P | |
| ??? | M | M.HpyCOL202ORF2350P (96% identity) | M.Hpy23AORFA1P | |
| ??? | R | HpySP306IVP (90% identity) | Hpy23AORFA1P | |
| ??? | S | S.HpyCOL301ORF3825P (49% identity) | S.Hpy23AORFVP | |
| ??? | R | HpyT005ORF3975P (96% identity) | CTANNNNNNNNTGT | Hpy23AORFIP |
| ??? | S | S.HpyS299IV (96% identity) | CTANNNNNNNNTGT | S.Hpy23AORFIP |
| ??? | M | M.HpySP806XIV (87% identity) | CTANNNNNNNNTGT | M.Hpy23AORFIP |
| ??? | S | S.HpySP706ORF7135P (96% identity) | S.Hpy23AORFOP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | HpyIR3ORF7055P (86% identity) | Hpy23AORFNP | |
| ??? | RM | HpyGRE046ORF7300P (97% identity) | Hpy23AORFAP | |
| ??? | S | S.HpyPO08ORF7155P (63% identity) | S.Hpy23AORFAP | |
| ??? | M | M2.HpyT004ORF7255P (100% identity) | M1.Hpy23AORFC1P | |
| ??? | M | M1.HpyG002ORF7460P (99% identity) | M2.Hpy23AORFC1P | |
| ??? | R | HpyG002ORF7460P (99% identity) | Hpy23AORFC1P | |
| ??? | M | M.HpyL009IV (100% identity) | TGCA | M.Hpy23AORFBP |
| ??? | R | HpySP601XIIP (99% identity) | TGCA | Hpy23AORFBP |
| ??? | M | M1.HpyR07IV (98% identity) | CCTC | M1.Hpy23AORFB1P |
| ??? | M | M2.Hpy2ALORF2515P (96% identity) | CCTC | M2.Hpy23AORFB1P |
| ??? | R | HpyU001VIP (96% identity) | Hpy23AORFCP | |
| ??? | M | M.HpyH021VII (97% identity) | M.Hpy23AORFCP | |
| ??? | M | M.HpyF002II (96% identity) | TCGA | M.Hpy23AORFDP |
| ??? | 188 aa hypothetical protein HMPREF1415_00409 | |||
| ??? | DNA -methyltransferase | |||
| ??? | R | HpyME27ORF1345P (86% identity) | CCGG | Hpy23AORFEP |
| ??? | M | M.HpySWT03IV (99% identity) | CCGG | M.Hpy23AORFEP |
| ??? | modification methylase VspI domain protein | |||
| ??? | M | M.HpyME32ORF2345P (100% identity) | M.Hpy23AORFZP | |
| ??? | M | M.HpyKH29ORFC1P (98% identity) | ATTAAT | M.Hpy23AORFYP |
| ??? | DNA adenine methylase | |||
| ??? | M | DNA adenine methylase | M.Hpy23AORFWP | |
| ??? | R | HpySWT04ORF2280P (98% identity) | ACNGT | Hpy23AORFWP |
| ??? | DNA cytosine methyltransferase | |||
| ??? | GIY-YIG nuclease family protein | |||
| ??? | M | M.HpySP303ORF2240P (94% identity) | M.Hpy23AORFXP | |
| ??? | M | M.HpyNCI2aVII (97% identity) | GTAC | M.Hpy23AORFFP |
| ??? | R | HpyC61XIIIP (89% identity) | GTAC | Hpy23AORFFP |
| ??? | RM | HpyIS10ORF3315P (85% identity) | Hpy23AORFGP | |
| ??? | R | HpySP507IVP (98% identity) | CGWCG | Hpy23AORFHP |
| ??? | M | M.Hpyfe21ORF4730P (99% identity) | CGWCG | M.Hpy23AORFHP |
| ??? | R | HpyNCI53VP (97% identity) | GTNNAC | Hpy23AORFJP |
| ??? | M | M.HpySP504X (92% identity) | GTNNAC | M.Hpy23AORFJP |
| ??? | M | M.HpyKH26ORFZP (98% identity) | TCNNGA | M.Hpy23AORFUP |
| ??? | R | HpyR03ORF5060P (97% identity) | TCNNGA | Hpy23AORFUP |
| ??? | M | M.HpyG006XIV (97% identity) | GCGC | M.Hpy23AORFKP |
| ??? | M | M.HpyCO1I (97% identity) | CATG | M.Hpy23AORFTP |
| ??? | R | HpyJ001IP (95% identity) | CATG | Hpy23AORFTP |
| ??? | R | HpyL018VIIP (97% identity) | Hpy23AORFRP | |
| ??? | M | M.HpyH015V (98% identity) | M.Hpy23AORFRP | |
| ??? | hypothetical protein | |||
| ??? | hypothetical protein | |||
| ??? | RM | HpyMM12ORF6370P (84% identity) | Hpy23AORFSP | |
| ??? | R | HpyI024VP (98% identity) | GAAGA | Hpy23AORFPP |
| ??? | M | M1.HpyCA26VII (99% identity) | GAAGA | M1.Hpy23AORFPP |
| ??? | M | M2.HpyU009V (94% identity) | M2.Hpy23AORFPP | |
| ??? | site-specific DNA-methyltransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyS299ORF6570P (98% identity) | M.Hpy23AORFMP | |
| ??? | R | HpySP323ORF7335P (93% identity) | Hpy23AORFMP | |
| ??? | DUF1887 family protein | |||
| ??? | M | M.HpyISR6ORF6475P (93% identity) | M.Hpy23AORFQP | |
| ??? | R | HpyLI24ORF6675P (94% identity) | Hpy23AORFQP | |
| ??? | M | M.HpyG8GORFLP (96% identity) | M.Hpy23AORFLP | |
| ??? | R | HpyF021ORF6590P (90% identity) | Hpy23AORFLP | |