Helicobacter pylori 21-F-EK1 |
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Putative Helicobacter pylori 21-F-EK1 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,583,343 bp
GenBank #: CP032479
REBASE acronym: Hpy21F
Org_num: 34976
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.Hpy21AORFYP (100% identity) | S.Hpy21FORFXP | |
| ??? | M | M.Hpy21AORFDP (100% identity) | M.Hpy21FORFDP | |
| ??? | S | S.Hpy21AORFDP (100% identity) | S.Hpy21FORFDP | |
| ??? | R | Hpy21AORFDP (100% identity) | Hpy21FORFDP | |
| ??? | S | S.HpyBG3ORF2855P (44% identity) | S.Hpy21FORFUP | |
| ??? | R | HpyNP02ORF2085P (89% identity) | Hpy21FORFQP | |
| ??? | M | M.Hpy21AORFGP (100% identity) | M.Hpy21FORFQP | |
| ??? | S | S.Hpy21AORFGP (100% identity) | S.Hpy21FORFQP | |
| ??? | R | Hpy21AORFMP (100% identity) | Hpy21FORFLP | |
| ??? | M | M.Hpy21AORFMP (100% identity) | M.Hpy21FORFLP | |
| ??? | S | S.Hpy21AORFMP (100% identity) | S.Hpy21FORFLP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | DEAD/DEAH box helicase | |||
| ??? | RM | Hpy21AORFA1P (100% identity) | Hpy21FORFZP | |
| ??? | RM | Hpy21AORFAP (100% identity) | Hpy21FORFAP | |
| ??? | S | S.Hpy21AORFAP (100% identity) | S.Hpy21FORFAP | |
| ??? | R | Hpy20AORFTP (70% identity) | CATG | Hpy21FORFWP |
| ??? | M | M.Hpy21AORFXP (100% identity) | CATG | M.Hpy21FORFWP |
| ??? | M | M.Hpy21AORFBP (100% identity) | GCGC | M.Hpy21FORFBP |
| ??? | R | Hpy21AORFWP (100% identity) | Hpy21FORFVP | |
| ??? | M | M.Hpy21AORFWP (100% identity) | M.Hpy21FORFVP | |
| ??? | M | M.Hpy21AORFCP (100% identity) | GTNNAC | M.Hpy21FORFCP |
| ??? | R | Hpy21AORFCP (100% identity) | GTNNAC | Hpy21FORFCP |
| ??? | RM | Hpy21AORFEP (100% identity) | Hpy21FORFEP | |
| ??? | R | Hpy21AORFFP (100% identity) | GTAC | Hpy21FORFFP |
| ??? | M | M.Hpy21AORFFP (100% identity) | GTAC | M.Hpy21FORFFP |
| ??? | M | M.Hpy21AORFTP (100% identity) | M.Hpy21FORFRP | |
| ??? | GIY-YIG nuclease family protein | |||
| ??? | DNA cytosine methyltransferase | |||
| ??? | R | Hpy21AORFUP (100% identity) | ACNGT | Hpy21FORFSP |
| ??? | M | M.Hpy21AORFUP (100% identity) | ACNGT | M.Hpy21FORFSP |
| ??? | modification methylase VspI domain protein | |||
| ??? | DNA adenine methylase | |||
| ??? | M | M.Hpy21AORFVP (99% identity) | ATTAAT | M.Hpy21FORFTP |
| ??? | M | M.HpySP11III (100% identity) | CCGG | M.Hpy21FORFGP |
| ??? | R | Hpy21AORFHP (100% identity) | CCGG | Hpy21FORFGP |
| ??? | M | M.Hpy21AORFIP (99% identity) | GATC | M.Hpy21FORFHP |
| ??? | R | Hpy21AORFPP (100% identity) | GTSAC | Hpy21FORFNP |
| ??? | M | M.Hpy21AORFPP (100% identity) | GTSAC | M.Hpy21FORFNP |
| ??? | hypothetical protein | |||
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | Hpy21AORFQP (100% identity) | CCTC | Hpy21FORFOP |
| ??? | M | M2.Hpy21AORFQP (100% identity) | CCTC | M2.Hpy21FORFOP |
| ??? | M | M1.Hpy21AORFQP (100% identity) | CCTC | M1.Hpy21FORFOP |
| ??? | DNA methyltransferase | |||
| ??? | DNA methyltransferase | |||
| ??? | RM | Hpy21AORFSP (95% identity) | Hpy21FORFPP | |
| ??? | M | M.Hpy21AORFNP (100% identity) | M.Hpy21FORFMP | |
| ??? | R | Hpy21AORFLP (100% identity) | TGCA | Hpy21FORFKP |
| ??? | M | M.Hpy21AORFLP (100% identity) | TGCA | M.Hpy21FORFKP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy21AORFZP (99% identity) | M.Hpy21FORFYP | |
| ??? | R | Hpy21AORFZP (100% identity) | Hpy21FORFYP | |
| ??? | class I SAM-dependent DNA methyltransferase | |||
| ??? | M | M.Hpy21AORFJP (100% identity) | M.Hpy21FORFIP | |
| ??? | R | Hpy21AORFJP (100% identity) | Hpy21FORFIP | |
| ??? | M | M.Hpy21AORFKP (100% identity) | M.Hpy21FORFJP | |
| ??? | R | Hpy21AORFKP (100% identity) | Hpy21FORFJP | |