Helicobacter pylori 476-A2-EK2 |
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Putative Helicobacter pylori 476-A2-EK2 RM systems
Ref: Ailloud,F. et al. Nat Commun 10 (1), 2273 (2019)
REBASE ref # 28879
Complete sequence: 1,649,543 bp
GenBank #: CP032473
REBASE acronym: Hpy476A2
Org_num: 34987
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyGE21ORF6935P (100% identity) | S.Hpy476A2ORFCP | |
| ??? | M | M.Hpy476CORFCP (100% identity) | M.Hpy476A2ORFCP | |
| ??? | S | S.Hpy476CORFWP (100% identity) | S.Hpy476A2ORFPP | |
| ??? | M | M.Hpy476CORFWP (100% identity) | M.Hpy476A2ORFPP | |
| ??? | R | Hpy476CORFWP (99% identity) | Hpy476A2ORFPP | |
| ??? | S | S.HpyDO1ORF2750P (92% identity) | S.Hpy476A2ORFWP | |
| ??? | R | Hpy476CORFQP (99% identity) | Hpy476A2ORFUP | |
| ??? | S | S2.Hpy476AORFOP (100% identity) | S.Hpy476A2ORFUP | |
| ??? | M | M.Hpy476CORFQBP (100% identity) | M.Hpy476A2ORFUBP | |
| ??? | M | type I restriction-modification system subunit M | M.Hpy476A2ORFUAP | |
| ??? | DNA cytosine methyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | DEAD/DEAH box helicase | |||
| ??? | RM | Hpy476CORFMP (100% identity) | Hpy476A2ORFMP | |
| ??? | RM | type II restriction modification enzyme methyltransferase | Hpy476A2ORFAP | |
| ??? | S | S1.Hpy476CORFAP (100% identity) | S1.Hpy476A2ORFAP | |
| ??? | S | S2.Hpy476CORFAP (100% identity) | S2.Hpy476A2ORFAP | |
| ??? | R | Hpy476CORFBP (100% identity) | GAATTC | Hpy476A2ORFBP |
| ??? | M | M.Hpy476CORFBP (100% identity) | GAATTC | M.Hpy476A2ORFBP |
| ??? | RM | Hpy476CORFXP (91% identity) | Hpy476A2ORFNP | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | DNA methyltransferase | |||
| ??? | M | M.Hpy476CORFYP (100% identity) | GANTC | M.Hpy476A2ORFOP |
| ??? | R | Hpy476CORFYP (100% identity) | GANTC | Hpy476A2ORFOP |
| ??? | R | HpyLI25VIP (100% identity) | Hpy476A2ORFEP | |
| ??? | M | M.Hpy476CORFDP (100% identity) | M.Hpy476A2ORFEP | |
| ??? | M | M.Hpy476CORFEP (100% identity) | M.Hpy476A2ORFFP | |
| ??? | M | M.Hpy476CORFFP (100% identity) | M.Hpy476A2ORFGP | |
| ??? | M | M.Hpy476CORFTP (100% identity) | ATTAAT | M.Hpy476A2ORFYP |
| ??? | DNA adenine methylase | |||
| ??? | modification methylase VspI domain protein | |||
| ??? | M | M.Hpy476CORFUP (100% identity) | ACNGT | M.Hpy476A2ORFZP |
| ??? | R | Hpy476CORFUP (100% identity) | ACNGT | Hpy476A2ORFZP |
| ??? | DNA cytosine methyltransferase | |||
| ??? | GIY-YIG nuclease family protein | |||
| ??? | M | M.Hpy476CORFVP (100% identity) | ACGT | M.Hpy476A2ORFA1P |
| ??? | R | Hpy476CORFVP (100% identity) | ACGT | Hpy476A2ORFA1P |
| ??? | M | M.Hpy476CORFSP (100% identity) | M.Hpy476A2ORFXP | |
| ??? | R | Hpy476CORFSP (100% identity) | Hpy476A2ORFXP | |
| ??? | type I restriction-modification system subunit M | |||
| ??? | M | M.HpyT021ORF4100P (100% identity) | M.Hpy476A2ORFVP | |
| ??? | R | Hpy476CORFRP (100% identity) | Hpy476A2ORFVP | |
| ??? | R | Hpy476CORFHP (100% identity) | GTNNAC | Hpy476A2ORFIP |
| ??? | M | M.Hpy476CORFHP (100% identity) | GTNNAC | M.Hpy476A2ORFIP |
| ??? | M | M.Hpy476CORFPP (100% identity) | M.Hpy476A2ORFTP | |
| ??? | R | Hpy476CORFPP (100% identity) | Hpy476A2ORFTP | |
| ??? | M | M.Hpy476CORFIP (100% identity) | CCGG | M.Hpy476A2ORFJP |
| ??? | R | Hpy476CORFIP (99% identity) | CCGG | Hpy476A2ORFJP |
| ??? | DNA -methyltransferase | |||
| ??? | endonuclease MjaVIP | |||
| ??? | M | M.Hpy476CORFJP (99% identity) | TCGA | M.Hpy476A2ORFKP |
| ??? | M | M.HpyG003II (98% identity) | GATC | M.Hpy476A2ORFSP |
| ??? | R | Hpy476CORFOP (100% identity) | GATC | Hpy476A2ORFSP |
| ??? | R | Hpy476CORFKP (99% identity) | CCTC | Hpy476A2ORFRP |
| ??? | DNA methyltransferase | |||
| ??? | M | M2.Hpy476AORFKP (100% identity) | CCTC | M2.Hpy476A2ORFRP |
| ??? | R | Hpy476CORFNP (100% identity) | Hpy476A2ORFQP | |
| ??? | M | M.HpyLI07ORF7820P (100% identity) | M.Hpy476A2ORFQP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy3sORF40P (94% identity) | M.Hpy476A2ORFLP | |
| ??? | R | Hpy476CORFLP (100% identity) | Hpy476A2ORFLP | |
| ??? | class I SAM-dependent DNA methyltransferase | |||
| ??? | R | HpyIR2ORF6375P (94% identity) | Hpy476A2ORFDP | |
| ??? | M | M.Hpy476CORFZP (98% identity) | M.Hpy476A2ORFDP | |
| ??? | R | Hpy476AORFGP (100% identity) | Hpy476A2ORFHP | |
| ??? | M | M.Hpy476CORFGP (100% identity) | M.Hpy476A2ORFHP | |