Escherichia coli K71-77 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli K71-77 RM systems
Ref: Gama,J.A. et al. unpublished
REBASE ref # 28857
| Sequence length: | GenBank #: | |
| Chromosome: | 4,934,660 bp | CP040886 |
| plasmid pK71-77-1-NDM: | 145,272 bp | CP040884 |
| plasmid pK71-77-2: | 117,590 bp | CP040885 |
REBASE acronym: Eco7177
Org_num: 34904
All begin FHY70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18775 | IS1 family transposase | |||
| 18780 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco7177ORF18790P |
| 18785 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco7177ORF18790P |
| 18790 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco7177ORF18790P |
| 18795 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10275 | ATP-binding protein | |||
| 10280 | M | M.EcosS3ORF15775P (100% identity) | M.Eco7177ORF10280P | |
| 10285 | 81 aa hypothetical protein | |||
| 10950 | phage lysis protein EssD | |||
| 10955 | M | M.Sso63633ORF22290P (100% identity) | M.Eco7177ORF10955P | |
| 10960 | TrmB family transcriptional regulator | |||
| 10995 | LexA family transcriptional regulator | |||
| 11000 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco7177ORF11000P |
| 11005 | PerC family transcriptional regulator | |||
| 14960 | cell division protein DamX | |||
| 14965 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco7177DamP |
| 14970 | ribulose-phosphate 3-epimerase | |||
| 15590 | DUF2556 domain-containing protein | |||
| 15595 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco7177ORF15595P |
| 15600 | DNA-binding transcriptional regulator Fis | |||
| 20235 | NinE family protein | |||
| 20240 | M | M.EcoK5643ORF16330P (95% identity) | M.Eco7177ORF20240P | |
| 20245 | protein ninF | |||
| 22760 | phosphohydrolase | |||
| 22765 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco7177DcmP |
| 22770 | V | V.SsoSE61DcmP (100% identity) | V.Eco7177DcmP | |
| 22775 | drug/metabolite exporter YedA | |||
| plasmid pK71-77-1-NDM | ||||
| 930 | 120 aa hypothetical protein | |||
| 5 | M | M.Sma1978ORFAP (97% identity) | M.Eco7177ORF5P | |
| 10 | 149 aa hypothetical protein | |||
| plasmid pK71-77-2 | ||||
| 1155 | 0 aa hypothetical protein | |||
| 1160 | M | M.Ecowhn14ORF35P (100% identity) | M.Eco7177ORF1160P | |
| 1165 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2660 | isocitrate dehydrogenase | |||
| 2665 | R | EcosEC27McrCP (100% identity) | Eco7177McrCP | |
| 2670 | R | EcoteDMcrBP (100% identity) | Eco7177McrBP | |
| 2675 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4225 | replication endonuclease | |||
| 4230 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco7177ORF4230P |
| 4235 | TraR/DksA family transcriptional regulator | |||