Arthrospira platensis Paraca |
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Putative Arthrospira platensis Paraca RM systems
Ref: Calmin,G. et al. unpublished
REBASE ref # 12318
Contig set: 5,212,495 bp
GenBank #: ACSK00000000
REBASE acronym: AplP
Org_num: 13648
All begin APPUASWS_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3025 | S | S.SplZORFAP (50% identity) | S.AplPORF3030P | |
| 3030 | M | M.SplZORFAP (98% identity) | M.AplPORF3030P | |
| 3035 | peptidase S1 | |||
| 3350 | 190 aa hypothetical protein | |||
| 3355 | R | AplORF330P (99% identity) | AplPORF3355P | |
| 3360 | metal-dependent hydrolase | |||
| 21865 | DNA polymerase | |||
| 21880 | R | Asp9108ORF19130P (100% identity) | AplPORF21900P | |
| 21885 | 99 aa hypothetical protein | |||
| 21890 | twitching motility protein PilT | |||
| 21895 | S | S.Apl39ORF38300P (100% identity) | S.AplPORF21900P | |
| 21900 | M | M.SplZORFBP (100% identity) | M.AplPORF21900P | |
| 21905 | transcriptional regulator | |||
| 4975 | 1,4-dihydroxy-2-naphthoate | |||
| 4980 | M | M.AplORF330P (99% identity) | M.AplPORF4980P | |
| 10800 | 75 aa hypothetical protein | |||
| 10815 | M | 200 aa hypothetical protein | M.AplPORF10815P | |
| 10820 | 321 aa hypothetical protein | |||
| 13245 | anthranilate phosphoribosyltransferase | |||
| 13250 | R | SplZORFAP (100% identity) | AplPORF13250P | |
| 13255 | 244 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3335 | type I restriction-modification system | |||
| 3340 | M | M.AplORF350P (100% identity) | CCTNAGG | M.AplPORF3340P |
| 3345 | 203 aa hypothetical protein | |||
| ??? | M | M.Asp9108ORF24165P (32% identity) | M.AplPORFBP | |
| ??? | RM | Asp9108ORF2715P (11% identity) | AplPORFCP | |
| 32335 | 143 aa hypothetical protein | |||
| ??? | M | M.Asp9108ORF15215P (24% identity) | M.AplPORFAP | |
| 10325 | 142 aa hypothetical protein | |||
| 4440 | alcohol dehydrogenase | |||
| 4445 | M | M.Asp9108ORF25595P (99% identity) | GGWCC | M.AplPORF4445P |
| 4450 | guanine permease | |||
| 26185 | 81 aa hypothetical protein | |||
| ??? | RM | Asp9108ORF29055P (100% identity) | AplPORF26195P | |
| 26200 | 129 aa hypothetical protein | |||
| 26185 | 81 aa hypothetical protein | |||
| ??? | RM | Asp9108ORF29055P (100% identity) | AplPORFEP | |
| 26200 | 129 aa hypothetical protein | |||
| 9615 | recombinase | |||
| 9620 | M | M.Asp9108ORF17565P (100% identity) | M.AplPORF9620P | |
| 9625 | 84 aa hypothetical protein | |||
| 10165 | glutathione S-transferase | |||
| 10170 | M | M.Asp9108ORF14670P (99% identity) | GGTNACC | M.AplPORF10170P |
| 10175 | R | Asp9108ORF14670P (100% identity) | GGTNACC | AplPORF10170P |
| 10180 | high light inducible protein | |||
| 26315 | recombinase | |||
| 26320 | M | M.Asp9108ORF29180P (100% identity) | M.AplPORF26320P | |
| 26325 | pseudogene | |||
| 11805 | 273 aa hypothetical protein | |||
| 11810 | M | M.Asp9108ORF16900P (100% identity) | GGYRCC | M.AplPORF11810P |
| 11815 | R | Asp9108ORF16900P (100% identity) | GGYRCC | AplPORF11810P |
| 11825 | cobalamin biosynthesis protein CobW | |||
| 16560 | restriction endonuclease | |||
| 16570 | M | M.Asp9108ORF24525P (96% identity) | GACNNNGTC | M.AplPORF16570P |
| ??? | R | AplORF580P (100% identity) | GACNNNGTC | AplPORF16570P |
| 16575 | beta-lactamase | |||
| 11500 | DNA recombination protein RecO | |||
| ??? | R | Asp9108ORF1515P (100% identity) | GRCGYC | AplPORF11510P |
| 11510 | M | M.SplZORFNP (100% identity) | GRCGYC | M.AplPORF11510P |
| 11520 | ATPase | |||
| 21920 | 213 aa hypothetical protein | |||
| ??? | R | Asp9108ORF19150P (100% identity) | CTGGAG | AplPORFDP |
| 21955 | 76 aa hypothetical protein | |||
| 7465 | 16S rRNA methyltransferase | |||
| 7470 | M | M.Asp9108ORF4400P (100% identity) | TACGTA | M.AplPORF7470P |
| ??? | R | Asp9108ORF4400P (100% identity) | TACGTA | AplPORF7470P |
| 7485 | C | C.Asp9108ORF4400P (100% identity) | C.AplPORF7470P | |
| 7490 | poly(A) polymerase | |||
| 18855 | 175 aa hypothetical protein | |||
| 18860 | M | M.AplYZORF28525P (100% identity) | TTCGAA | M.AplPORF18860P |
| ??? | R | Asp9108ORF31225P (85% identity) | TTCGAA | AplPORF18860P |
| 18870 | 352 aa hypothetical protein | |||
| 22530 | helicase | |||
| 22535 | RM | Asp9108ORF3245P (100% identity) | AplPORF22535P | |
| 22540 | DNA polymerase III subunit beta | |||
| 10785 | pseudogene | |||
| 10790 | M | M.SplZORFDP (100% identity) | CGTACG | M.AplPORF10790P |
| ??? | R | SplZORFDP (100% identity) | CGTACG | AplPORF10790P |
| 10800 | 75 aa hypothetical protein | |||
| 16005 | 392 aa hypothetical protein | |||
| 16010 | RM | AplORF1000P (100% identity) | AplPORF16010P | |
| 16015 | chemotaxis protein CheY | |||
| 12925 | LOR/SDH bifunctional protein | |||
| ??? | M | M.SplZORFGP (100% identity) | GCTNAGC | M.AplPORF12930P |
| 12935 | R | Asp9108ORF20455P (100% identity) | GCTNAGC | AplPORF12930P |
| 12940 | ABC transporter permease | |||
| 16340 | hemolysin | |||
| 16345 | M | M.SplZORFLP (100% identity) | CGATCG | M.AplPORF16345P |
| 16350 | allophycocyanin | |||
| 20605 | 265 aa hypothetical protein | |||
| 20610 | R | Asp9108ORF20760P (100% identity) | CTGCAG | AplPORF20615P |
| 20615 | M | M.SplZORFOP (100% identity) | CTGCAG | M.AplPORF20615P |
| 20620 | UDP-N-acetylglucosamine 2-epimerase | |||
| 23360 | recombinase | |||
| 23370 | M | M.Asp9108ORF27410P (100% identity) | M.AplPORF23370P | |
| 23375 | 84 aa hypothetical protein | |||
| 19400 | zinc metalloprotease | |||
| 19410 | M | M.SplZORFMP (100% identity) | GCSGC | M.AplPORF19410P |
| 19415 | 3-oxoacyl-ACP synthase | |||
| 19500 | 91 aa hypothetical protein | |||
| 19515 | M | M.AplORF790P (74% identity) | M.AplPORF19515P | |
| 20745 | S-adenosylmethionine decarboxylase | |||
| 20750 | M | M.Asp9108ORF20865P (100% identity) | GATC | M.AplPORF20750P |
| 20760 | DNA polymerase | |||
| 25750 | cysteine lyase | |||
| 25755 | M | M.AplORF1180P (99% identity) | ATGCAT | M.AplPORF25755P |
| 25760 | R | AvaIII (65% identity) | ATGCAT | AplPORF25755P |
| 25765 | phosphoribosyltransferase | |||
| 29520 | 130 aa hypothetical protein | |||
| 29525 | C | C.AplYZORF19815P (100% identity) | C.AplPORF29535P | |
| 29530 | R | Asp9108ORF21810P (100% identity) | RCATGY | AplPORF29535P |
| ??? | M | M.Asp9108ORF21810P (100% identity) | RCATGY | M.AplPORF29535P |
| 29540 | 88 aa hypothetical protein | |||
| 23660 | 86 aa hypothetical protein | |||
| ??? | R | Asp9108ORF27710P (96% identity) | ACCGGT | AplPORF23675P |
| 23675 | M | M.Asp9108ORF27710P (100% identity) | ACCGGT | M.AplPORF23675P |
| 23680 | pseudogene | |||
| 24365 | DNA polymerase | |||
| 24370 | M | M.SplZORFKP (100% identity) | M.AplPORF24370P | |
| 24375 | 359 aa hypothetical protein | |||
| 26120 | 84 aa hypothetical protein | |||
| 26125 | M | M.Asp9108ORF31020P (100% identity) | M.AplPORF26125P | |
| 27955 | 98 aa hypothetical protein | |||
| 27960 | R | Asp9108ORF2700P (100% identity) | CCGCGG | AplPORF27965P |
| 27965 | M | M.AplYZORF2560P (100% identity) | CCGCGG | M.AplPORF27965P |
| 27970 | DEAD/DEAH box helicase | |||
| 27975 | transposase | |||
| 27980 | RM | AplORF5890P (66% identity) | AplPORF27980P | |
| 31870 | M | M.Asp9108ORF24165P (40% identity) | M.AplPORF31870P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16555 | 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase | |||
| 16560 | R | Asp9108MrrP (100% identity) | AplPMrrP | |
| 16570 | DNA methylase | |||