Putative Citrobacter freundii R47 RM systems
Ref: Zhou,W. and Chen,Q. unpublished
REBASE ref # 28819
Sequence length: | GenBank #: | |
chromosome R47: | 4,952,107 bp | CP040698 |
plasmid pR47-309: | 309,536 bp | CP040696 |
plasmid pR47-54: | 53,964 bp | CP040697 |
REBASE acronym: CfrR47
Org_num: 34841
All begin FGF61_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome R47 | ||||
11140 | endoribonuclease SymE | |||
11145 | S | S.Cfr8049ORF20255P (100% identity) | S.CfrR47ORF11150P | |
11150 | M | M.Cfr8049ORF20255P (100% identity) | M.CfrR47ORF11150P | |
11155 | R | CfrHM38IP (100% identity) | CfrR47ORF11150P | |
11160 | restriction endonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome R47 | ||||
5555 | DNA-binding transcriptional regulator Fis | |||
5560 | M | M.CspMGH103ORFEP (100% identity) | ATGCAT | M.CfrR47ORF5560P |
5565 | DUF2556 domain-containing protein | |||
6100 | ribulose-phosphate 3-epimerase | |||
6105 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrR47DamP |
6110 | cell division protein DamX | |||
10820 | DUF4102 domain-containing protein | |||
10825 | RM | Kox493ORF26145P (99% identity) | CfrR47ORF10825P | |
10830 | ATP-dependent helicase | |||
17925 | DUF4406 domain-containing protein | |||
17930 | M | M.Cfr8049ORF12690P (95% identity) | M.CfrR47ORF17930P | |
17935 | 68 aa hypothetical protein | |||
18540 | DNA replication protein | |||
18545 | M | M.CfrF3321ORF12540P (97% identity) | M.CfrR47ORF18545P | |
18550 | DUF968 domain-containing protein | |||
22015 | 72 aa hypothetical protein | |||
22020 | M | M.Cpo64ACORF21795P (99% identity) | M.CfrR47ORF22020P | |
22025 | 147 aa hypothetical protein | |||
22560 | drug/metabolite exporter YedA | |||
22565 | V | V.CfrCF51ORF5055P (99% identity) | V.CfrR47ORF22570P | |
22570 | M | M.CfrMH16V (99% identity) | CCWGG | M.CfrR47ORF22570P |
22575 | phosphohydrolase | |||
plasmid pR47-309 | ||||
515 | resolvase | |||
520 | R | YpsR1ORFAP (99% identity) | CCWGG | CfrR47ORF525P |
525 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.CfrR47ORF525P |
530 | IS1 family transposase | |||
635 | DUF1173 domain-containing protein | |||
640 | M | M.Ssp15303DcmP (100% identity) | M.CfrR47DcmP | |
645 | nuclease | |||
1435 | 106 aa hypothetical protein | |||
1440 | M | M.Ssp15303ORFDP (100% identity) | M.CfrR47ORF1440P | |
1445 | 202 aa hypothetical protein | |||
1585 | DNA-binding protein | |||
1590 | M | M.Ssp15303ORFEP (100% identity) | M.CfrR47ORF1590P | |
1595 | 284 aa hypothetical protein | |||
plasmid pR47-54 | ||||
2085 | IS1 family transposase | |||
2090 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.CfrR47ORF2090P |
2095 | R | YpsR1ORFAP (99% identity) | CCWGG | CfrR47ORF2090P |
2100 | resolvase |