Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- SA20082869 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- SA20082869 RM systems
Ref: Schonfeld,J. et al. unpublished
REBASE ref # 28592
| Sequence length: | GenBank #: | |
| Chromosome: | 4,904,134 bp | CP040668 |
| plasmid pSA20082869.1: | 107,560 bp | CP040669 |
REBASE acronym: Sen82869
Org_num: 35639
All begin FGO77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23870 | endoribonuclease SymE | |||
| 23875 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen82869ORF23880P |
| 23880 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen82869ORF23880P |
| 23885 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen82869ORF23880P |
| 23890 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10690 | drug/metabolite exporter YedA | |||
| 10695 | V | V.StyUK1DcmP (100% identity) | V.Sen82869DcmP | |
| 10700 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen82869DcmP |
| 10705 | phosphohydrolase | |||
| 10955 | RusA family crossover junction | |||
| 10960 | M | M.StyUK1V (100% identity) | GATC | M.Sen82869ORF10960P |
| 10965 | PerC family transcriptional regulator | |||
| 14300 | RusA family crossover junction | |||
| 14305 | M | M.Sty13348ORF110P (100% identity) | M.Sen82869ORF14305P | |
| 14310 | PerC family transcriptional regulator | |||
| 17870 | DNA-binding transcriptional regulator Fis | |||
| 17875 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen82869ORF17875P |
| 17880 | DUF2556 domain-containing protein | |||
| 18360 | ribulose-phosphate 3-epimerase | |||
| 18365 | M | M.StyTDamP (100% identity) | GATC | M.Sen82869DamP |
| 18370 | cell division protein DamX | |||
| 23720 | ATP-binding protein | |||
| 23725 | RM | StyUK1IV (100% identity) | GATCAG | Sen82869ORF23725P |
| 23730 | BREX system P-loop protein BrxC | |||
| plasmid pSA20082869.1 | ||||
| 24785 | 62 aa hypothetical protein | |||
| 24790 | M | M.StyUK1ORFAP (100% identity) | M.Sen82869ORF24790P | |
| 24795 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2125 | MFS transporter | |||
| 2130 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen82869ORF2130P |
| 2135 | R | StyUK1IP (99% identity) | CAGAG | Sen82869ORF2130P |
| 2140 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23885 | type I restriction-modification system | |||
| 23890 | R | StyUK1MrrP (100% identity) | Sen82869MrrP | |
| 23895 | BrnT family toxin | |||