Escherichia coli EK2009 |
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Putative Escherichia coli EK2009 RM systems
Ref: Can,Z. unpublished
REBASE ref # 28854
Complete sequence: 4,605,015 bp
GenBank #: CP040663
REBASE acronym: EcoEK2009
Org_num: 34901
All begin FE383_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22035 | endoribonuclease SymE | |||
| 22040 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoEK2009ORF22045P |
| 22045 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoEK2009ORF22045P |
| 22050 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoEK2009ORF22045P |
| 22055 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10070 | drug/metabolite exporter YedA | |||
| 10075 | V | V.SflFF64DcmP (100% identity) | V.EcoEK2009DcmP | |
| 10080 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoEK2009DcmP |
| 10085 | phosphohydrolase | |||
| 16480 | DNA-binding transcriptional regulator Fis | |||
| 16485 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoEK2009ORF16485P |
| 16490 | DUF2556 domain-containing protein | |||
| 17115 | ribulose-phosphate 3-epimerase | |||
| 17120 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoEK2009DamP |
| 17125 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5840 | site-specific DNA recombinase | |||
| 5845 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoEK2009ORF5845P |
| 5850 | isocitrate dehydrogenase | |||
| 22020 | 906 aa hypothetical protein | |||
| 22025 | R | SenHNK130McrCP (100% identity) | EcoEK2009McrCP | |
| 22030 | R | SenHNK130McrBP (100% identity) | EcoEK2009McrBP | |
| 22035 | endoribonuclease SymE | |||
| 22050 | type I restriction-modification system | |||
| 22055 | R | EcoKR2009MrrP (100% identity) | EcoEK2009MrrP | |
| 22060 | GTPase | |||