Salmonella enterica subsp. enterica serovar Senftenberg SL180013 |
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Putative Salmonella enterica subsp. enterica serovar Senftenberg SL180013 RM systems
Ref: Morita,M. et al. unpublished
REBASE ref # 29011
Complete sequence: 4,980,580 bp
GenBank #: AP019692
REBASE acronym: Sen80013
Org_num: 35633
All begin SL180013_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6300 | 207 aa hypothetical protein | |||
| 6310 | M | M.Sen71954ORF5700P (100% identity) | M.Sen80013ORF6310P | |
| 6320 | anticodon nuclease | |||
| 6330 | S | S.Sen71954ORF5700P (100% identity) | S.Sen80013ORF6310P | |
| 6340 | 61 aa hypothetical protein | |||
| 6350 | R | Sen71954ORF5700P (100% identity) | Sen80013ORF6310P | |
| 6360 | 72 aa hypothetical protein | |||
| 39970 | restriction endonuclease | |||
| 39980 | R | Sen775WIIP (100% identity) | CNGANNNNNNNNTGCG | Sen80013ORF39990P |
| 39990 | M | M.Sen775WII (100% identity) | CNGANNNNNNNNTGCG | M.Sen80013ORF39990P |
| 40000 | S | S.SenSW70ORF19425P (100% identity) | CNGANNNNNNNNTGCG | S.Sen80013ORF39990P |
| 40010 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3630 | cell division protein DamX | |||
| 3640 | M | M.StyTDamP (100% identity) | GATC | M.Sen80013DamP |
| 3650 | ribulose-phosphate 3-epimerase | |||
| 4560 | 54 aa hypothetical protein | |||
| 4570 | M | M.Sen775WORF2695P (100% identity) | ATGCAT | M.Sen80013ORF4570P |
| 4580 | DNA-binding protein Fis | |||
| 10910 | 353 aa hypothetical protein | |||
| 10920 | RM | Sma1978ORFHP (100% identity) | CTTGAC | Sen80013ORF10920P |
| 10930 | 681 aa hypothetical protein | |||
| 14080 | 80 aa hypothetical protein | |||
| ??? | M | M1.SenRM074ORF7060P (100% identity) | M.Sen80013ORFAP | |
| 14100 | conjugal transfer protein TraR | |||
| 14120 | 74 aa hypothetical protein | |||
| 14130 | M | M.Ecl23bORF2925P (97% identity) | M.Sen80013ORF14130P | |
| 14140 | DUF1317 domain-containing protein | |||
| 20030 | replication protein | |||
| 20040 | M | M.SenST224ORF7170P (100% identity) | M.Sen80013ORF20040P | |
| 20050 | crossover junction endodeoxyribonuclease rusA | |||
| 27930 | drug/metabolite exporter YedA | |||
| 27940 | V | V.StyUK1DcmP (100% identity) | V.Sen80013DcmP | |
| 27950 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen80013DcmP |
| 27960 | phosphohydrolase | |||
| 28850 | 59 aa hypothetical protein | |||
| 28860 | M | M.SenS051ORF14720P (100% identity) | M.Sen80013ORF28860P | |
| 28870 | 82 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11270 | Cd(II)/Pb(II)-responsive transcriptional | |||
| 11280 | M | M.SenC6482ORF1287P (100% identity) | M.Sen80013ORF11280P | |
| 11290 | R | Sen25333ORF15170P (100% identity) | Sen80013ORF11280P | |
| 11300 | 208 aa hypothetical protein | |||
| 35050 | cytochrome ubiquinol oxidase subunit I | |||
| 35060 | R | Sen775WIVP (100% identity) | CAGAG | Sen80013ORF35070P |
| 35070 | M | M.SenSW70ORF17195P (100% identity) | CAGAG | M.Sen80013ORF35070P |
| 35080 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 39960 | membrane protein | |||
| 39970 | R | StyTMrrP (100% identity) | Sen80013MrrP | |
| 39980 | type I restriction-modification system | |||