Salmonella enterica subsp. enterica serovar Infantis TR01 |
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Putative Salmonella enterica subsp. enterica serovar Infantis TR01 RM systems
Ref: Mustak,I.B. and Yardimci,H. unpublished
REBASE ref # 29006
Complete sequence: 4,874,756 bp
GenBank #: CP040600
REBASE acronym: SenTR01
Org_num: 35625
All begin FE168_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23165 | endoribonuclease SymE | |||
| 23170 | S | S.SenTR01mORF23185P (100% identity) | S.SenTR01ORF23175P | |
| 23175 | M | M.SenTR01mORF23185P (100% identity) | M.SenTR01ORF23175P | |
| 23180 | R | SenTR01mORF23185P (100% identity) | SenTR01ORF23175P | |
| 23185 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5590 | phosphohydrolase | |||
| 5595 | M | M.SenTR01mDcmP (100% identity) | CCWGG | M.SenTR01DcmP |
| 5600 | V | V.StyUK1DcmP (100% identity) | V.SenTR01DcmP | |
| 5605 | drug/metabolite exporter YedA | |||
| 15510 | conjugal transfer protein | |||
| 15515 | R | SenTR01mORF15530P (100% identity) | SenTR01ORF15520P | |
| 15520 | M | M.SenTR01mORF15530P (100% identity) | M.SenTR01ORF15520P | |
| 15525 | TIGR03747 family integrating conjugative element | |||
| 17685 | ribulose-phosphate 3-epimerase | |||
| 17690 | M | M.StyTDamP (100% identity) | GATC | M.SenTR01DamP |
| 17695 | cell division protein DamX | |||
| 22835 | 97 aa hypothetical protein | |||
| 22840 | M | M.SenTR01mDndBP (100% identity) | M.SenTR01DndBP | |
| 22845 | DNA phosphorothioation system sulfurtransferase | |||
| 22840 | DNA sulfur modification protein DndB | |||
| 22845 | M | M.SenTR01mDndCP (100% identity) | M.SenTR01DndCP | |
| 22850 | DNA sulfur modification protein DndD | |||
| 22845 | DNA phosphorothioation system sulfurtransferase | |||
| 22850 | M | M.SenTR01mDndDP (100% identity) | M.SenTR01DndDP | |
| 22855 | 141 aa hypothetical protein | |||
| 22850 | DNA sulfur modification protein DndD | |||
| 22855 | M | 141 aa hypothetical protein | M.SenTR01DndD2P | |
| 22860 | DNA sulfur modification protein DndE | |||
| 22855 | 141 aa hypothetical protein | |||
| 22860 | M | M.SenTR01mDndEP (100% identity) | M.SenTR01DndEP | |
| 22865 | DUF262 domain-containing protein | |||
| 23020 | ATP-binding cassette domain-containing protein | |||
| 23025 | RM | SenTR01mORF23035P (100% identity) | GNGGCAG | SenTR01ORF23025P |
| 23030 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | MFS transporter | |||
| 1755 | M | M.SenTR01mORF1755P (100% identity) | CAGAG | M.SenTR01ORF1755P |
| 1760 | R | SensSZL31ORF18150P (100% identity) | CAGAG | SenTR01ORF1755P |
| 1765 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23180 | type I restriction-modification system | |||
| 23185 | R | SenTR01mMrrP (100% identity) | SenTR01MrrP | |
| 23190 | BrnT family toxin | |||