Salmonella enterica subsp. enterica serovar Infantis strain TR01 mutant |
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Putative Salmonella enterica subsp. enterica serovar Infantis strain TR01 mutant RM systems
Ref: Mustak,I.B. and Yardimci,H. unpublished
REBASE ref # 29006
Complete sequence: 4,874,441 bp
GenBank #: CP040601
REBASE acronym: SenTR01m
Org_num: 35619
All begin FE265_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23175 | endoribonuclease SymE | |||
| 23180 | S | S.SenTR01ORF23175P (100% identity) | S.SenTR01mORF23185P | |
| 23185 | M | M.SenTR01ORF23175P (100% identity) | M.SenTR01mORF23185P | |
| 23190 | R | SenTR01ORF23175P (100% identity) | SenTR01mORF23185P | |
| 23195 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5600 | phosphohydrolase | |||
| 5605 | M | M.SenTR01DcmP (100% identity) | CCWGG | M.SenTR01mDcmP |
| 5610 | V | V.StyUK1DcmP (100% identity) | V.SenTR01mDcmP | |
| 5615 | drug/metabolite exporter YedA | |||
| 15520 | conjugal transfer protein | |||
| 15525 | R | SenTR01ORF15520P (100% identity) | SenTR01mORF15530P | |
| 15530 | M | M.SenTR01ORF15520P (100% identity) | M.SenTR01mORF15530P | |
| 15535 | TIGR03747 family integrating conjugative element | |||
| 17225 | DNA-binding transcriptional regulator Fis | |||
| 17230 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenTR01mORF17230P |
| 17235 | DUF2556 domain-containing protein | |||
| 17695 | ribulose-phosphate 3-epimerase | |||
| 17700 | M | M.StyTDamP (100% identity) | GATC | M.SenTR01mDamP |
| 17705 | cell division protein DamX | |||
| 22845 | 97 aa hypothetical protein | |||
| 22850 | M | M.SenTR01DndBP (100% identity) | M.SenTR01mDndBP | |
| 22855 | DNA phosphorothioation system sulfurtransferase | |||
| 22850 | DNA sulfur modification protein DndB | |||
| 22855 | M | M.SenTR01DndCP (100% identity) | M.SenTR01mDndCP | |
| 22860 | DNA sulfur modification protein DndD | |||
| 22855 | DNA phosphorothioation system sulfurtransferase | |||
| 22860 | M | M.SenTR01DndDP (100% identity) | M.SenTR01mDndDP | |
| 22865 | 141 aa hypothetical protein | |||
| 22860 | DNA sulfur modification protein DndD | |||
| 22865 | M | 141 aa hypothetical protein | M.SenTR01mDndD2P | |
| 22870 | DNA sulfur modification protein DndE | |||
| 22865 | 141 aa hypothetical protein | |||
| 22870 | M | M.SenTR01DndEP (100% identity) | M.SenTR01mDndEP | |
| 22875 | DUF262 domain-containing protein | |||
| 23030 | ATP-binding cassette domain-containing protein | |||
| 23035 | RM | SenTR01ORF23025P (100% identity) | GNGGCAG | SenTR01mORF23035P |
| 23040 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | MFS transporter | |||
| 1755 | M | M.SenTR01ORF1755P (100% identity) | CAGAG | M.SenTR01mORF1755P |
| 1760 | R | SensSZL31ORF18150P (100% identity) | CAGAG | SenTR01mORF1755P |
| 1765 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23190 | type I restriction-modification system | |||
| 23195 | R | SenTR01MrrP (100% identity) | SenTR01mMrrP | |
| 23200 | BrnT family toxin | |||