Salmonella enterica subsp. enterica serovar Typhi WGS1146 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhi WGS1146 RM systems
Ref: Engsbro,A.L. et al. Euro Surveill. (2019) In press
REBASE ref # 29004
| Sequence length: | GenBank #: | |
| Chromosome: | 4,813,117 bp | CP040575 |
| plasmid unnamed: | 84,498 bp | CP040574 |
REBASE acronym: Sen1146
Org_num: 35615
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen1146ORFIP |
| ??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen1146ORFIP |
| ??? | S | S.Sen948aORFHP (100% identity) | GAANNNNNNNNTCGC | S.Sen1146ORFIP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | Dam-Mip130 | GATC | M.Sen1146DamP |
| ??? | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen1146ORFCP |
| ??? | M | M.StyTORF1926P (100% identity) | M.Sen1146ORFDP | |
| ??? | M | M.StyTORF1914P (100% identity) | M.Sen1146ORFBP | |
| ??? | V | V.StyTDcmP (100% identity) | V.Sen1146DcmP | |
| ??? | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen1146DcmP |
| ??? | M | M.StyTORF4329P (100% identity) | M.Sen1146ORFGP | |
| ??? | M | M.StyTORF3409P (100% identity) | GATC | M.Sen1146ORFAP |
| plasmid unnamed | ||||
| ??? | RM | SenPK1ORF23900P (100% identity) | ATGAAG | Sen1146ORFEP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen1146ORFHP |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen1146ORFHP |
| ??? | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen1146ORFFP | |
| ??? | R | StyTORF872P (100% identity) | Sen1146ORFFP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | StyTMrrP (100% identity) | Sen1146MrrP | |