Pseudopropionibacterium propionicum F0700 |
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Putative Pseudopropionibacterium propionicum F0700 RM systems
Ref: Collins,A.J. et al. unpublished
REBASE ref # 28789
Complete sequence: 3,437,242 bp
GenBank #: CP040007
REBASE acronym: Ppr700
Org_num: 35018
All begin FBF34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14000 | MarR family transcriptional regulator | |||
| 14005 | M | M.Ppr230bI (100% identity) | CAGNNNNNCTGG | M.Ppr700I |
| 14010 | virulence RhuM family protein | |||
| 14015 | S | S.Ppr230bI (100% identity) | CAGNNNNNCTGG | S.Ppr700I |
| 14020 | restriction endonuclease | |||
| 14025 | R | Ppr230bIP (100% identity) | CAGNNNNNCTGG | Ppr700IP |
| 14030 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4230 | DUF2399 domain-containing protein | |||
| 4235 | R | Ppr230bORFEP (100% identity) | Ppr700ORF4235P | |
| 4240 | 302 aa hypothetical protein | |||
| 8750 | ATP-binding protein | |||
| 8755 | S | S.Ppr12967ORF1761P (92% identity) | S.Ppr700ORF8755P | |
| 8760 | DUF1156 domain-containing protein | |||
| 8755 | DUF1016 domain-containing protein | |||
| 8760 | M | M.Ppr230bORFFP (100% identity) | M.Ppr700ORF8760P | |
| 8765 | R | ApoF0714ORF6795P (97% identity) | Ppr700ORF8760P | |
| 8770 | 255 aa hypothetical protein | |||
| 12475 | 63 aa hypothetical protein | |||
| 12480 | M | M.Ppr230bORFBP (86% identity) | M.Ppr700ORF12480P | |
| 12485 | 82 aa hypothetical protein | |||
| 12920 | helix-turn-helix domain-containing protein | |||
| 12925 | R | Ppr230bIIP (100% identity) | GAGCTC | Ppr700IIP |
| 12930 | M | M.Ppr230bII (95% identity) | GAGCTC | M.Ppr700II |
| 12935 | recombinase family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14530 | glycosyl hydrolase family protein | |||
| 14535 | R | Ppr230bORFDP (93% identity) | Ppr700ORF14545P | |
| 14540 | transcriptional regulator | |||
| 14545 | M | M.Ppr230bORFDP (100% identity) | M.Ppr700ORF14545P | |
| 14550 | DEAD/DEAH box helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2150 | serine dehydrogenase | |||
| 2155 | R | Ppr230bMcrBP (100% identity) | Ppr700McrBP | |
| 2160 | R | Ppr230bMcrCP (97% identity) | Ppr700McrCP | |
| 2165 | 229 aa hypothetical protein | |||
| 3410 | sn-glycerol-3-phosphate ABC transporter | |||
| 3415 | R | Ppr230bMrr2P (100% identity) | Ppr700MrrP | |
| 3420 | DedA family protein | |||
| 14015 | restriction endonuclease subunit S | |||
| 14020 | R | Ppr230bMrrP (100% identity) | Ppr700Mrr2P | |
| 14025 | type I restriction endonuclease subunit R | |||