Escherichia coli BA22372 |
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Putative Escherichia coli BA22372 RM systems
Ref: Devanga Ragupathi,N.K. et al. unpublished
REBASE ref # 28853
| Sequence length: | GenBank #: | |
| Chromosome: | 4,759,293 bp | CP040397 |
| plasmid pCTX-M-15_22372: | 98,470 bp | CP040398 |
REBASE acronym: Eco22372
Org_num: 34900
All begin FEV15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12225 | M48 family metallopeptidase | |||
| 12230 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | Eco22372ORF12250P |
| 12235 | macro domain-containing protein | |||
| 12240 | DUF4433 domain-containing protein | |||
| 12245 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.Eco22372ORF12250P |
| 12250 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.Eco22372ORF12250P |
| 12255 | transcription factor | |||
| 20510 | IS3 family transposase | |||
| 20515 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco22372ORF20515P |
| 20520 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco22372ORF20515P |
| 20525 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco22372ORF20515P |
| 20530 | IS1 family transposase | |||
| plasmid pCTX-M-15_22372 | ||||
| 23585 | type II toxin-antitoxin system Phd/YefM family | |||
| 23590 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNNCTGG | M.Eco22372ORF23590P |
| 23595 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.Eco22372ORF23590P |
| 23600 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNNCTGG | Eco22372ORF23590P |
| 23605 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 535 | DNA-binding transcriptional regulator Fis | |||
| 540 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco22372ORF540P |
| 545 | DUF2556 domain-containing protein | |||
| 1165 | ribulose-phosphate 3-epimerase | |||
| 1170 | M | adenine-specific DNA-methyltransferase | GATC | M.Eco22372DamP |
| 1175 | cell division protein DamX | |||
| 4245 | 68 aa hypothetical protein | |||
| 4250 | M | M.EcosE2ORF21575P (100% identity) | M.Eco22372ORF4250P | |
| 4255 | 345 aa hypothetical protein | |||
| 6345 | 146 aa hypothetical protein | |||
| 6350 | RM | Eas2ORF4840P (99% identity) | Eco22372ORF6350P | |
| 6355 | 223 aa hypothetical protein | |||
| 16960 | drug/metabolite exporter YedA | |||
| 16965 | V | V.SsoSE61DcmP (100% identity) | V.Eco22372DcmP | |
| 16970 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco22372DcmP |
| 16975 | phosphohydrolase | |||
| plasmid pCTX-M-15_22372 | ||||
| 23705 | 0 aa hypothetical protein | |||
| 23710 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco22372ORF23710P |
| 23715 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12940 | recombinase family protein | |||
| 12945 | R | EcoteDMcrBP (100% identity) | Eco22372McrBP | |
| 12950 | R | EcosEC27McrCP (100% identity) | Eco22372McrCP | |
| 12955 | isocitrate dehydrogenase | |||