Ruminococcus species JE7A12 |
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Putative Ruminococcus species JE7A12 RM systems
Ref: Embree,M. and Gaffney,J.R. unpublished
REBASE ref # 28998
Complete sequence: 2,440,231 bp
GenBank #: CP039381
REBASE acronym: Rsp7A12
Org_num: 35598
All begin E5Z56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2350 | cell wall assembly/cell proliferation | |||
| 2355 | R | Pba22567ORF4885P (68% identity) | Rsp7A12ORF2360P | |
| 2360 | M | M.Dsp5638ORFCP (81% identity) | M.Rsp7A12ORF2360P | |
| 2365 | S | S2.ScoH2489ORFCP (37% identity) | S.Rsp7A12ORF2360P | |
| 2370 | 103 aa hypothetical protein | |||
| 5590 | 220 aa hypothetical protein | |||
| 5595 | M | M.Lru211ORF889P (34% identity) | M1.Rsp7A12ORF5595P | |
| 5600 | 171 aa hypothetical protein | |||
| 5605 | M | M.Amu500aORF8050P (79% identity) | M2.Rsp7A12ORF5595P | |
| 5610 | S | S.PmeBin100ORFDP (39% identity) | S.Rsp7A12ORF5595P | |
| 5615 | R | Gme92ORFBP (72% identity) | Rsp7A12ORF5595P | |
| 5620 | 95 aa hypothetical protein | |||
| 8790 | 347 aa hypothetical protein | |||
| 8795 | M | M.CspC1ORF6530P (86% identity) | M.Rsp7A12ORF8795P | |
| 8800 | S | S1.Cse1583ORF15615P (30% identity) | S1.Rsp7A12ORF8795P | |
| 8805 | S | S.CboST7BII (28% identity) | S2.Rsp7A12ORF8795P | |
| 8810 | integrase | |||
| 8815 | S | S3.Lin335ORF3095P (45% identity) | S3.Rsp7A12ORF8795P | |
| 8820 | 165 aa hypothetical protein | |||
| 8825 | R | PmeBin189ORFCP (80% identity) | Rsp7A12ORF8795P | |
| 8830 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1555 | NUDIX hydrolase | |||
| 1560 | RM | BREX-1 system adenine-specific | Rsp7A12ORF1560P | |
| 1565 | 283 aa hypothetical protein | |||
| 3670 | helix-turn-helix domain-containing protein | |||
| 3675 | M | M.PmeBin376ORFCP (77% identity) | M.Rsp7A12ORF3675P | |
| 3680 | TdeIII family type II restriction endonuclease | |||
| 5320 | 73 aa hypothetical protein | |||
| 5325 | M | M.Esis15702ORF8235P (65% identity) | M.Rsp7A12ORF5325P | |
| 5330 | 205 aa hypothetical protein | |||
| 5330 | 205 aa hypothetical protein | |||
| 5335 | R | M.Esi703ORF6770P (35% identity) | Rsp7A12ORF5335P | |
| 5340 | 167 aa hypothetical protein | |||
| 5345 | V | V.Esis15702ORF8225P (73% identity) | V.Rsp7A12ORF5335P | |
| 5350 | DUF1624 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 670 | 194 aa hypothetical protein | |||
| 675 | R | BprPMF1McrCP (64% identity) | Rsp7A12McrCP | |
| 680 | R | Ava988McrBP (30% identity) | Rsp7A12McrBP | |
| 685 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| 5210 | 272 aa hypothetical protein | |||
| 5215 | R | Esi703ORF17830P (72% identity) | Rsp7A12ORF5215P | |
| 5220 | (deoxy)nucleoside triphosphate | |||