Pseudomonas mendocina NSYSU |
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Putative Pseudomonas mendocina NSYSU RM systems
Ref: Calcutt,M.J. et al. unpublished
REBASE ref # 28890
Complete sequence: 5,238,364 bp
GenBank #: CP011508
REBASE acronym: PmeNSYSU
Org_num: 35009
All begin PSMEN_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13225 | ABC transporter | |||
| 13230 | S | S.MspYMA4ORF14105P (57% identity) | S.PmeNSYSUORF13235P | |
| 13235 | M | M.UbaO2ORFAP (98% identity) | M.PmeNSYSUORF13235P | |
| 13240 | R | Ppu03ORF29560P (96% identity) | PmeNSYSUORF13235P | |
| 13245 | transcriptional regulator | |||
| 15200 | XRE family transcriptional regulator | |||
| 15205 | R | PaeZM03ORFFP (96% identity) | PmeNSYSUORF15215P | |
| 15210 | S | S.Psy457ORF2825P (84% identity) | S.PmeNSYSUORF15215P | |
| 15215 | M | M.PaeLo565ORF25365P (95% identity) | M.PmeNSYSUORF15215P | |
| 15220 | 211 aa hypothetical protein | |||
| 18180 | helicase | |||
| 18185 | R | PaeSPA01ORF21810P (98% identity) | PmeNSYSUORF18210P | |
| 18190 | Fic family protein | |||
| 18195 | restriction endonuclease | |||
| 18200 | GTPase subunit of restriction endonuclease | |||
| 18205 | S | S.Pae11452I (52% identity) | S.PmeNSYSUORF18210P | |
| 18210 | M | M.Pae48ORF8470P (89% identity) | M.PmeNSYSUORF18210P | |
| 18215 | 98 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18995 | beta-lactamase | |||
| 19000 | M | M.PmeIV (95% identity) | CGCCGGCG | M.PmeNSYSUORF19000P |
| 19005 | DNA-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18190 | Fic family protein | |||
| 18195 | R | PspBJP69McrCP (84% identity) | PmeNSYSUMcrCP | |
| 18200 | R | PalMRCP2McrB2P (72% identity) | PmeNSYSUMcrBP | |
| 18205 | 478 aa hypothetical protein | |||