Salmonella enterica subsp. enterica serovar Typhimurium E2840153550 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium E2840153550 RM systems
Ref: Schonfeld,J. et al. unpublished
REBASE ref # 28592
| Sequence length: | GenBank #: | |
| Chromosome: | 4,923,481 bp | CP040321 |
| plasmid p16-6397.1: | 93,911 bp | CP040322 |
REBASE acronym: Sen53550
Org_num: 35601
All begin E5O16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23970 | endoribonuclease SymE | |||
| 23975 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen53550ORF23980P |
| 23980 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen53550ORF23980P |
| 23985 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen53550ORF23980P |
| 23990 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10700 | drug/metabolite exporter YedA | |||
| 10705 | V | V.StyUK1DcmP (100% identity) | V.Sen53550DcmP | |
| 10710 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen53550DcmP |
| 10715 | phosphohydrolase | |||
| 10970 | RusA family crossover junction | |||
| 10975 | M | M.StyUK1V (100% identity) | GATC | M.Sen53550ORF10975P |
| 10980 | PerC family transcriptional regulator | |||
| 14330 | RusA family crossover junction | |||
| 14335 | M | M.Sty13348ORF110P (100% identity) | M.Sen53550ORF14335P | |
| 14340 | PerC family transcriptional regulator | |||
| 18020 | DNA-binding transcriptional regulator Fis | |||
| 18025 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen53550ORF18025P |
| 18030 | DUF2556 domain-containing protein | |||
| 18510 | ribulose-phosphate 3-epimerase | |||
| 18515 | M | M.StyTDamP (100% identity) | GATC | M.Sen53550DamP |
| 18520 | cell division protein DamX | |||
| 23820 | ATP-binding protein | |||
| 23825 | RM | StyUK1IV (100% identity) | GATCAG | Sen53550ORF23825P |
| 23830 | BREX system P-loop protein BrxC | |||
| plasmid p16-6397.1 | ||||
| 24855 | 62 aa hypothetical protein | |||
| 24860 | M | M.StyUK1ORFAP (100% identity) | M.Sen53550ORF24860P | |
| 24865 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2125 | MFS transporter | |||
| 2130 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen53550ORF2130P |
| 2135 | R | StyUK1IP (99% identity) | CAGAG | Sen53550ORF2130P |
| 2140 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23985 | type I restriction-modification system | |||
| 23990 | R | StyUK1MrrP (100% identity) | Sen53550MrrP | |
| 23995 | BrnT family toxin | |||