Escherichia coli AR24.2b |
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Putative Escherichia coli AR24.2b RM systems
Ref: Nigg,A. et al. unpublished
REBASE ref # 28852
Complete sequence: 4,666,029 bp
GenBank #: CP035944
REBASE acronym: Eco242b
Org_num: 34899
All begin EXT04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5780 | IS1 family transposase | |||
| 5785 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco242bORF5795P |
| 5790 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco242bORF5795P |
| 5795 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco242bORF5795P |
| 5800 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1950 | cell division protein DamX | |||
| 1955 | M | adenine-specific DNA-methyltransferase | GATC | M.Eco242bDamP |
| 1960 | ribulose-phosphate 3-epimerase | |||
| 2580 | DUF2556 domain-containing protein | |||
| 2585 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco242bORF2585P |
| 2590 | DNA-binding transcriptional regulator Fis | |||
| 5820 | DUF4102 domain-containing protein | |||
| 5825 | M | M.Ecoi64ORF2425P (100% identity) | M.Eco242bORF5825P | |
| 5830 | AAA family ATPase | |||
| 5905 | PerC family transcriptional regulator | |||
| 5910 | M | M.KpnHs33ORF24645P (100% identity) | GATC | M.Eco242bORF5910P |
| 5915 | LexA family transcriptional regulator | |||
| 5950 | TrmB family transcriptional regulator | |||
| 5955 | M | M.Sso63633ORF22290P (100% identity) | M.Eco242bORF5955P | |
| 5960 | phage lysis protein EssD | |||
| 9290 | phosphohydrolase | |||
| 9295 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco242bDcmP |
| 9300 | V | V.EcosEC7DcmP (100% identity) | V.Eco242bDcmP | |
| 9305 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9135 | shufflon system plasmid conjugative transfer | |||
| 9140 | R | Sensp14178ORF9290P (100% identity) | Eco242bORF9145P | |
| 9145 | M | M.Sensp14178ORF9290P (100% identity) | M.Eco242bORF9145P | |
| 9150 | DUF4102 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13200 | isocitrate dehydrogenase | |||
| 13205 | R | EcosEC27McrCP (100% identity) | Eco242bMcrCP | |
| 13210 | R | EcoteDMcrBP (100% identity) | Eco242bMcrBP | |
| 13215 | recombinase family protein | |||