Duncaniella species B8 |
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Putative Duncaniella species B8 RM systems
Ref: Miyake,S. et al. unpublished
REBASE ref # 28510
Complete sequence: 3,384,950 bp
GenBank #: CP040121
REBASE acronym: DspB8
Org_num: 34755
All begin FDZ78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 500 | DUF3800 domain-containing protein | |||
| 505 | R | Gme92ORFGP (100% identity) | DspB8ORF520P | |
| 510 | S | S.Gme92ORFGP (44% identity) | S1.DspB8ORF520P | |
| 515 | S | S.Gme92ORFGP (54% identity) | S2.DspB8ORF520P | |
| 520 | M | M.Gme92ORFGP (97% identity) | M.DspB8ORF520P | |
| 525 | 228 aa hypothetical protein | |||
| 12490 | site-specific integrase | |||
| 12495 | S | S1.DspC9ORF8815P (100% identity) | S3.DspB8ORF12510P | |
| 12500 | S | S2.MspA4ORF8360P (100% identity) | S2.DspB8ORF12510P | |
| 12505 | S | S3.DspC9ORF8815P (100% identity) | S1.DspB8ORF12510P | |
| 12510 | M | M.MspA4ORF8360P (100% identity) | M.DspB8ORF12510P | |
| 12515 | R | DspC9ORF8815P (100% identity) | DspB8ORF12510P | |
| 12520 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 115 | 89 aa hypothetical protein | |||
| 120 | M | M.DspC9ORF12390P (100% identity) | M.DspB8ORF120P | |
| 125 | 155 aa hypothetical protein | |||
| 355 | 308 aa hypothetical protein | |||
| 360 | R | Mch3bORF6685P (25% identity) | DspB8ORFP | |
| 365 | restriction endonuclease | |||
| 375 | restriction endonuclease | |||
| 380 | M | M.DspC9DndEP (100% identity) | M.DspB8DndEP | |
| 385 | DNA sulfur modification protein DndD | |||
| 380 | DUF1832 domain-containing protein | |||
| 385 | M | M.DspC9DndDP (100% identity) | M.DspB8DndDP | |
| 390 | DNA phosphorothioation system sulfurtransferase | |||
| 385 | DNA sulfur modification protein DndD | |||
| 390 | M | M.DspC9DndCP (100% identity) | M.DspB8DndCP | |
| 395 | helix-turn-helix transcriptional regulator | |||
| 645 | LlaJI family restriction endonuclease | |||
| 650 | R | DspC9ORF11855P (100% identity) | DspB8ORF655P | |
| 655 | M | M.DspC9ORF11855P (100% identity) | M.DspB8ORF655P | |
| 660 | helix-turn-helix transcriptional regulator | |||
| 665 | V | V.DspC9ORF11855P (100% identity) | V.DspB8ORF655P | |
| 670 | 248 aa hypothetical protein | |||
| 3505 | thymidylate synthase | |||
| 3510 | M | M.DspC9ORF14270P (100% identity) | M.DspB8ORF3510P | |
| 3515 | 126 aa hypothetical protein | |||
| 3960 | sigma-54-dependent Fis family transcriptional | |||
| 3965 | M | M.DspC9ORF260P (100% identity) | M.DspB8ORF3965P | |
| 3970 | 742 aa hypothetical protein | |||
| 4095 | helicase | |||
| 4100 | RM | DspC9ORF395P (100% identity) | DspB8ORF4100P | |
| 4105 | 334 aa hypothetical protein | |||
| 7975 | glutamate--tRNA ligase | |||
| 7980 | M | M.DspC9ORF4270P (100% identity) | M.DspB8ORF7980P | |
| 7985 | R | DspC9ORF4270P (100% identity) | DspB8ORF7980P | |
| 7990 | redox-sensing transcriptional repressor Rex | |||
| 8470 | DUF3127 domain-containing protein | |||
| 8475 | M | M.DspC9ORF4770P (100% identity) | M.DspB8ORF8475P | |
| 8480 | R | DspC9ORF4770P (100% identity) | DspB8ORF8475P | |
| 8485 | 184 aa hypothetical protein | |||
| 11640 | 80 aa hypothetical protein | |||
| 11645 | M | M1.DspC9ORF7940P (100% identity) | M1.DspB8ORF11645P | |
| 11650 | M | M2.DspC9ORF7940P (100% identity) | M2.DspB8ORF11645P | |
| 11655 | 66 aa hypothetical protein | |||
| 12350 | 133 aa hypothetical protein | |||
| 12355 | M | M.DspC9ORF8660P (100% identity) | M.DspB8ORF12355P | |
| 12360 | 68 aa hypothetical protein | |||