Azospirillum brasilense MTCC4035 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Azospirillum brasilense MTCC4035 RM systems
Ref: Singh,C. and Tripathi,A.K. unpublished
REBASE ref # 28717
| Sequence length: | GenBank #: | |
| Chromosome: | 3,007,928 bp | CP032321 |
| plasmid p1: | 1,930,550 bp | CP032322 |
| plasmid p7: | 163,663 bp | CP032328 |
REBASE acronym: Abr4035
Org_num: 34657
All begin D3093_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8620 | M48 family peptidase | |||
| 8625 | R | Ath21654IIIP (97% identity) | GGYANNNNNNRTGCG | Abr4035IP |
| 8630 | S | S1.MspVF16ORF16730P (36% identity) | GGYANNNNNNRTGCG | S.Abr4035I |
| 8635 | M | M.Ath21654III (96% identity) | GGYANNNNNNRTGCG | M.Abr4035I |
| 8640 | 149 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p1 | ||||
| 17345 | 694 aa hypothetical protein | |||
| 17350 | M | M.UmmNPORFCP (27% identity) | M.Abr4035ORF17350P | |
| 17355 | V | V.LspBMJM1ORFCP (58% identity) | V.Abr4035ORF17350P | |
| 17360 | DUF927 domain-containing protein | |||
| 18140 | ribonuclease HII | |||
| 18145 | M | M.AbrREC3ORF8585P (100% identity) | GANTC | M.Abr4035II |
| 18150 | dihydroneopterin aldolase | |||
| plasmid p7 | ||||
| 35015 | 134 aa hypothetical protein | |||
| 35020 | M | M.Abr4036ORF36385P (99% identity) | M.Abr4035ORF35020P | |
| 35025 | 93 aa hypothetical protein | |||
| 35250 | 70 aa hypothetical protein | |||
| 35255 | M | M.AbrAz39ORF7255P (61% identity) | M.Abr4035ORF35255P | |
| 35260 | 214 aa hypothetical protein | |||
| 35295 | 159 aa hypothetical protein | |||
| 35300 | M | M.Abr4036ORF36115P (94% identity) | M.Abr4035ORF35300P | |
| 35305 | 99 aa hypothetical protein | |||
| 35540 | 135 aa hypothetical protein | |||
| 35545 | M | M.SspWHORF20565P (51% identity) | M.Abr4035ORF35545P | |
| 35550 | IS256 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8605 | site-specific integrase | |||
| 8610 | R | AspB510MrrP (98% identity) | Abr4035MrrP | |
| 8615 | 231 aa hypothetical protein | |||