Salmonella enterica subsp. enterica serovar California CD-SL01 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar California CD-SL01 RM systems
Ref: Wang,Y. unpublished
REBASE ref # 18165
Complete sequence: 4,833,791 bp
GenBank #: CP028900
REBASE acronym: SenSL01
Org_num: 34685
All begin DBQ98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20960 | 322 aa hypothetical protein | |||
| 20965 | R | SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | SenSL01ORF20970P |
| 20970 | M | M.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | M.SenSL01ORF20970P |
| 20975 | S | S.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | S.SenSL01ORF20970P |
| 20980 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1785 | cell division protein DamX | |||
| 1790 | M | M.StyTDamP (100% identity) | GATC | M.SenSL01DamP |
| 1795 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 domain-containing protein | |||
| 2300 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSL01ORF2300P |
| 2305 | Fis family transcriptional regulator | |||
| 3315 | DUF1173 domain-containing protein | |||
| 3320 | M | M.YpsF1ORFCP (100% identity) | M.SenSL01ORF3320P | |
| 3325 | thermonuclease family protein | |||
| 14745 | drug/metabolite exporter YedA | |||
| 14750 | V | V.StyUK1DcmP (100% identity) | V.SenSL01DcmP | |
| 14755 | M | M.SensTJX21DcmP (100% identity) | CCWGG | M.SenSL01DcmP |
| 14760 | phosphohydrolase | |||
| 18705 | phage holin, lambda family | |||
| 18710 | M | M.SensSZL38ORF10585P (100% identity) | M.SenSL01ORF18710P | |
| 18715 | 104 aa hypothetical protein | |||
| 18740 | LexA family transcriptional regulator | |||
| 18745 | M | M.SflN101ORF11410P (100% identity) | GATC | M.SenSL01ORF18745P |
| 18750 | PerC family transcriptional regulator | |||
| 21155 | RM | SensTJX21ORF12050P (100% identity) | SenSL01ORF21155P | |
| 21160 | ATP-dependent helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18335 | 33 aa hypothetical protein | |||
| 18340 | R | StyUK1IP (99% identity) | CAGAG | SenSL01ORF18345P |
| 18345 | M | M.SensTJX21ORF9690P (100% identity) | CAGAG | M.SenSL01ORF18345P |
| 18350 | MFS transporter | |||