Escherichia coli 107 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 107 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,442,851 bp | CP028695 |
| plasmid pTA107: | 92,718 bp | CP028697 |
REBASE acronym: Eco107B
Org_num: 34663
All begin C9E36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25635 | DUF262 domain-containing protein | |||
| 25640 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco107BORF25645P |
| 25645 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco107BORF25645P |
| 25650 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco107BORF25645P |
| 25655 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2460 | protein DamX | |||
| 2465 | M | DNA adenine methylase | GATC | M.Eco107BDamP |
| 2470 | ribulose-phosphate 3-epimerase | |||
| 3010 | DUF2556 domain-containing protein | |||
| 3015 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco107BORF3015P |
| 3020 | Fis family transcriptional regulator | |||
| 9335 | recombination protein NinB | |||
| 9340 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco107BORF9340P |
| 9345 | NinE family protein | |||
| 10845 | phosphohydrolase | |||
| 10850 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco107BDcmP |
| 10855 | V | V.EcosPA8DcmP (100% identity) | V.Eco107BDcmP | |
| 10860 | drug/metabolite exporter YedA | |||
| 14140 | 81 aa hypothetical protein | |||
| 14145 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco107BORF14145P | |
| 14150 | 329 aa hypothetical protein | |||
| 15700 | 61 aa hypothetical protein | |||
| 15715 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco107BORF15715P | |
| 15720 | lipoprotein | |||
| 18855 | NinE family protein | |||
| 18860 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco107BORFAP |
| 18865 | recombination protein NinB | |||
| 25900 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco107BORF25900P |
| 25905 | ATP-dependent helicase | |||
| plasmid pTA107 | ||||
| 29365 | 59 aa hypothetical protein | |||
| 29370 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco107BORF29370P | |
| 29375 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25655 | endoribonuclease SymE | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco107BGmrDP | |
| 25665 | R | Ecos1613GmrSP (100% identity) | Eco107BGmrSP | |
| 25670 | DUF1127 domain-containing protein | |||