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Putative Escherichia coli 109 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
Sequence length: | GenBank #: | |
Chromosome: | 5,442,850 bp | CP028690 |
plasmid pTA109: | 92,714 bp | CP028692 |
REBASE acronym: Eco109B
Org_num: 34665
All begin C9E38_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
25635 | DUF262 domain-containing protein | |||
25640 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco109BORF25645P |
25645 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco109BORF25645P |
25650 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco109BORF25645P |
25655 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2460 | protein DamX | |||
2465 | M | DNA adenine methylase | GATC | M.Eco109BDamP |
2470 | ribulose-phosphate 3-epimerase | |||
3010 | DUF2556 domain-containing protein | |||
3015 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco109BORF3015P |
3020 | Fis family transcriptional regulator | |||
9335 | recombination protein NinB | |||
9340 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco109BORF9340P |
9345 | NinE family protein | |||
10845 | phosphohydrolase | |||
10850 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco109BDcmP |
10855 | V | V.EcosPA8DcmP (100% identity) | V.Eco109BDcmP | |
10860 | drug/metabolite exporter YedA | |||
14140 | 81 aa hypothetical protein | |||
14145 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco109BORF14145P | |
14150 | 329 aa hypothetical protein | |||
15700 | 61 aa hypothetical protein | |||
15715 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco109BORF15715P | |
15720 | lipoprotein | |||
18855 | NinE family protein | |||
18860 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco109BORF18860P |
18865 | recombination protein NinB | |||
25900 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco109BORF25900P |
25905 | ATP-dependent helicase | |||
plasmid pTA109 | ||||
29365 | 59 aa hypothetical protein | |||
29370 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco109BORF29370P | |
29375 | 73 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
25655 | endoribonuclease SymE | |||
??? | R | EcoX21GmrDP (100% identity) | Eco109BGmrDP | |
25665 | R | Ecos1613GmrSP (100% identity) | Eco109BGmrSP | |
25670 | DUF1127 domain-containing protein |