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Putative Escherichia coli 111 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
Sequence length: | GenBank #: | |
Chromosome: | 5,508,269 bp | CP028685 |
plasmid pTA111: | 92,724 bp | CP028686 |
REBASE acronym: Eco111B
Org_num: 34667
All begin C9E40_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
26100 | DUF262 domain-containing protein | |||
26105 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco111BORF26110P |
26110 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco111BORF26110P |
26115 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco111BORF26110P |
26120 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2465 | protein DamX | |||
2470 | M | DNA adenine methylase | GATC | M.Eco111BDamP |
2475 | ribulose-phosphate 3-epimerase | |||
3015 | DUF2556 domain-containing protein | |||
3020 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco111BORF3020P |
3025 | Fis family transcriptional regulator | |||
9340 | recombination protein NinB | |||
9345 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco111BORF9345P |
9350 | NinE family protein | |||
10840 | phosphohydrolase | |||
10845 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco111BDcmP |
10850 | V | V.EcosPA8DcmP (100% identity) | V.Eco111BDcmP | |
10855 | drug/metabolite exporter YedA | |||
14890 | 329 aa hypothetical protein | |||
14895 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco111BORF14895P | |
14900 | 81 aa hypothetical protein | |||
15795 | 61 aa hypothetical protein | |||
15810 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco111BORF15810P | |
15815 | lipoprotein | |||
19335 | NinE family protein | |||
19340 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco111BORF18900P |
19345 | recombination protein NinB | |||
26365 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco111BORF26365P |
26370 | ATP-dependent helicase | |||
plasmid pTA111 | ||||
29765 | 59 aa hypothetical protein | |||
29770 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco111BORF29770P | |
29775 | 73 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
26120 | endoribonuclease SymE | |||
??? | R | EcoX21GmrDP (100% identity) | Eco111BGmrDP | |
26130 | R | Ecos1613GmrSP (100% identity) | Eco111BGmrSP | |
26135 | DUF1127 domain-containing protein |