Escherichia coli 117 |
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Putative Escherichia coli 117 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,455,349 bp | CP028668 |
| plasmid pTA117: | 94,491 bp | CP028670 |
REBASE acronym: Eco117B
Org_num: 34673
All begin C9E46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25610 | DUF262 domain-containing protein | |||
| 25615 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco117BORF25620P |
| 25620 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco117BORF25620P |
| 25625 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco117BORF25620P |
| 25630 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2455 | protein DamX | |||
| 2460 | M | DNA adenine methylase | GATC | M.Eco117BDamP |
| 2465 | ribulose-phosphate 3-epimerase | |||
| 3005 | DUF2556 domain-containing protein | |||
| 3010 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco117BORF3010P |
| 3015 | Fis family transcriptional regulator | |||
| 10315 | recombination protein NinB | |||
| 10320 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco117BORF10320P |
| 10325 | NinE family protein | |||
| 11260 | phosphohydrolase | |||
| 11265 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco117BDcmP |
| 11270 | V | V.EcosPA8DcmP (100% identity) | V.Eco117BDcmP | |
| 11275 | drug/metabolite exporter YedA | |||
| 15840 | 61 aa hypothetical protein | |||
| 15855 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco117BORF15855P | |
| 15860 | lipoprotein | |||
| 23515 | LexA family transcriptional regulator | |||
| 23520 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco117BORF23520P |
| 23525 | PerC family transcriptional regulator | |||
| 25880 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco117BORF25880P |
| 25885 | ATP-dependent helicase | |||
| 25990 | Polarity suppression protein | |||
| 25995 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco117BORF25995P |
| 26000 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco117BORF25995P |
| 26005 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco117BORF25995P |
| 26010 | DUF4102 domain-containing protein | |||
| plasmid pTA117 | ||||
| 29450 | 101 aa hypothetical protein | |||
| 29455 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco117BORF29455P | |
| 29460 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25630 | endoribonuclease SymE | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco117BGmrDP | |
| 25640 | R | Ecos1613GmrSP (100% identity) | Eco117BGmrSP | |
| 25645 | DUF1127 domain-containing protein | |||