Escherichia coli 120 |
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Putative Escherichia coli 120 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,455,348 bp | CP028659 |
| plasmid pTA120: | 94,493 bp | CP028661 |
REBASE acronym: Eco120B
Org_num: 34676
All begin C9E49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25615 | DUF262 domain-containing protein | |||
| 25620 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco120BORF25625P |
| 25625 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco120BORF25625P |
| 25630 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco120BORF25625P |
| 25635 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2460 | protein DamX | |||
| 2465 | M | DNA adenine methylase | GATC | M.Eco120BDamP |
| 2470 | ribulose-phosphate 3-epimerase | |||
| 3010 | DUF2556 domain-containing protein | |||
| 3015 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco120BORF3015P |
| 3020 | Fis family transcriptional regulator | |||
| 10320 | recombination protein NinB | |||
| 10325 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco120BORF10325P |
| 10330 | NinE family protein | |||
| 11265 | phosphohydrolase | |||
| 11270 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco120BDcmP |
| 11275 | V | V.EcosPA8DcmP (100% identity) | V.Eco120BDcmP | |
| 11280 | drug/metabolite exporter YedA | |||
| 15845 | 61 aa hypothetical protein | |||
| 15860 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco120BORF15860P | |
| 15865 | lipoprotein | |||
| 23520 | LexA family transcriptional regulator | |||
| 23525 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco120BORF23525P |
| 23530 | PerC family transcriptional regulator | |||
| 25885 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco120BORF25885P |
| 25890 | ATP-dependent helicase | |||
| 26000 | 87 aa hypothetical protein | |||
| 26005 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco120BORF26005P |
| 26010 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco120BORF26005P |
| 26015 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco120BORF26005P |
| 26020 | DUF4102 domain-containing protein | |||
| plasmid pTA120 | ||||
| 29460 | 101 aa hypothetical protein | |||
| 29465 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco120BORF29465P | |
| 29470 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25635 | endoribonuclease SymE | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco120BGmrDP | |
| 25645 | R | Ecos1613GmrSP (100% identity) | Eco120BGmrSP | |
| 25650 | DUF1127 domain-containing protein | |||