Escherichia coli 122 |
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Putative Escherichia coli 122 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,454,175 bp | CP028654 |
| plasmid pTA122: | 92,732 bp | CP028655 |
REBASE acronym: EcoJB122
Org_num: 34641
All begin C9E51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25700 | DUF262 domain-containing protein | |||
| 25705 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoJB122ORF25710P |
| 25710 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoJB122ORF25710P |
| 25715 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoJB122ORF25710P |
| 25720 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2460 | protein DamX | |||
| 2465 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoJB122DamP |
| 2470 | ribulose-phosphate 3-epimerase | |||
| 3010 | DUF2556 domain-containing protein | |||
| 3015 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoJB122ORF3015P |
| 3020 | Fis family transcriptional regulator | |||
| 9340 | recombination protein NinB | |||
| 9345 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoJB122ORF9345P |
| 9350 | NinE family protein | |||
| 10875 | phosphohydrolase | |||
| 10880 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoJB122DcmP |
| 10885 | V | V.EcosPA8DcmP (100% identity) | V.EcoJB122DcmP | |
| 10890 | drug/metabolite exporter YedA | |||
| 14930 | 329 aa hypothetical protein | |||
| 14935 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoJB122ORF14935P | |
| 14940 | 81 aa hypothetical protein | |||
| 15830 | 61 aa hypothetical protein | |||
| 15845 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoJB122ORF15845P | |
| 15850 | lipoprotein | |||
| 18925 | NinE family protein | |||
| 18930 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoJB122ORF18930P |
| 18935 | recombination protein NinB | |||
| 25965 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoJB122ORF25965P |
| 25970 | ATP-dependent helicase | |||
| plasmid pTA122 | ||||
| 29360 | 59 aa hypothetical protein | |||
| 29365 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoJB122ORF29365P | |
| 29370 | 73 aa hypothetical protein | |||