Neisseria flavescens ATCC 13120 |
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Putative Neisseria flavescens ATCC 13120 RM systems
Ref: Streich,R.O. et al. unpublished
REBASE ref # 28701
Complete sequence: 2,231,882 bp
GenBank #: CP039886
REBASE acronym: Nfl13120
Org_num: 34642
All begin FAH67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4045 | L-aspartate oxidase | |||
| 4050 | M | M.Nme9390IV (100% identity) | M.Nfl13120ORF4050P | |
| 4055 | S | S.Nme9390IV (100% identity) | S.Nfl13120ORF4050P | |
| 4060 | R | Nme9390IVP (100% identity) | Nfl13120ORF4050P | |
| 4065 | molybdenum cofactor guanylyltransferase | |||
| 9320 | TlpA family protein disulfide reductase | |||
| 9325 | R | NflHORF1839P (100% identity) | Nfl13120ORF9340P | |
| 9330 | S | S.Nme9390II (100% identity) | S.Nfl13120ORF9340P | |
| 9335 | virulence RhuM family protein | |||
| 9340 | M | M.Nme9390II (100% identity) | M.Nfl13120ORF9340P | |
| 9345 | cell division ATP-binding protein FtsE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3135 | 76 aa hypothetical protein | |||
| 3140 | M | M.NflHORF697P (100% identity) | GCGCGC | M.Nfl13120ORF3140P |
| 3145 | R | Nme9390ORF605P (100% identity) | GCGCGC | Nfl13120ORF3140P |
| 3150 | alanine--tRNA ligase | |||
| 3660 | NADH:flavin oxidoreductase/NADH oxidase family | |||
| 3665 | S | S.NflHORF1491P (100% identity) | S.Nfl13120ORF3670P | |
| 3670 | RM | Nme9390ORF711P (100% identity) | Nfl13120ORF3670P | |
| 3675 | rRNA pseudouridine synthase | |||
| 3740 | 3-isopropylmalate dehydrogenase | |||
| 3745 | R | Nme9390ORF727P (100% identity) | GGNNCC | Nfl13120ORF3750P |
| 3750 | M | M.Npo43768ORF501P (100% identity) | GGNNCC | M.Nfl13120ORF3750P |
| 3755 | 3-isopropylmalate dehydratase small subunit | |||
| 4365 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- | |||
| 4370 | RM | Nme9390I (100% identity) | GCGGAG | Nfl13120ORF4370P |
| 4375 | FeoB-associated Cys-rich membrane protein | |||
| 5680 | S41 family peptidase | |||
| 5685 | H | H.Nme9390ORF1612P (100% identity) | H.Nfl13120ORF5695P | |
| 5690 | R | Nme9390ORF1612P (100% identity) | Nfl13120ORF5695P | |
| 5695 | M | M.Nme9390ORF1612P (100% identity) | M.Nfl13120ORF5695P | |
| 5700 | 65 aa hypothetical protein | |||
| 6055 | RNA pyrophosphohydrolase | |||
| 6060 | V | V.Nme9390ORF1687P (100% identity) | V.Nfl13120ORF6065P | |
| 6065 | M | M.Nme9390ORF1687P (99% identity) | CCGG | M.Nfl13120ORF6065P |
| 6070 | R | Nme9390ORF1687P (100% identity) | CCGG | Nfl13120ORF6065P |
| 6075 | type IIA DNA topoisomerase subunit B | |||
| 8075 | leucine--tRNA ligase | |||
| 8080 | M | M1.Nme9390III (99% identity) | M1.Nfl13120ORF8080P | |
| 8085 | M | M2.Nme9390III (100% identity) | GATC | M2.Nfl13120ORF8080P |
| 8090 | DNA mismatch repair protein MutH | |||
| 8095 | C | C.Nme9390IIIP (100% identity) | C.Nfl13120ORF8080P | |
| 8100 | bifunctional acetaldehyde-CoA/alcohol | |||
| 10265 | ATP-dependent RNA helicase HrpA | |||
| 10270 | R | Nme9390VP (99% identity) | Nfl13120ORF10275P | |
| 10275 | M | M.Nme9390V (100% identity) | M.Nfl13120ORF10275P | |
| 10280 | DUF3418 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9205 | S9 family peptidase | |||
| ??? | M | M.Nel10207ORFEP (93% identity) | M.Nfl13120ORF9215P | |
| 9220 | R | Nme9390ORF2125P (100% identity) | Nfl13120ORF9215P | |
| 9225 | acyl carrier protein | |||