Escherichia coli 142 |
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Putative Escherichia coli 142 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,428,191 bp | CP028609 |
| plasmid pTA142: | 92,725 bp | CP028612 |
| plasmid pTA142-2: | 88,018 bp | CP028611 |
| plasmid pTA142-3: | 67,786 bp | CP028610 |
REBASE acronym: Eco142
Org_num: 34626
All begin C9E66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25530 | DUF262 domain-containing protein | |||
| 25535 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco142ORF25540P |
| 25540 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco142ORF25540P |
| 25545 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco142ORF25540P |
| 25550 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2460 | protein DamX | |||
| 2465 | M | DNA adenine methylase | GATC | M.Eco142DamP |
| 2470 | ribulose-phosphate 3-epimerase | |||
| 3010 | DUF2556 domain-containing protein | |||
| 3015 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco142ORF3015P |
| 3020 | Fis family transcriptional regulator | |||
| 9345 | recombination protein NinB | |||
| 9350 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco142ORF9350P |
| 9355 | NinE family protein | |||
| 10865 | phosphohydrolase | |||
| 10870 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco142DcmP |
| 10875 | V | V.EcosPA8DcmP (100% identity) | V.Eco142DcmP | |
| 10880 | drug/metabolite exporter YedA | |||
| 14520 | 329 aa hypothetical protein | |||
| 14525 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco142ORF14525P | |
| 14530 | 81 aa hypothetical protein | |||
| 15430 | 61 aa hypothetical protein | |||
| 15445 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco142ORF15445P | |
| 15450 | lipoprotein | |||
| 18770 | NinE family protein | |||
| 18775 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco142ORF18775P |
| 18780 | recombination protein NinB | |||
| 25795 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco142ORF25795P |
| 25800 | ATP-dependent helicase | |||
| plasmid pTA142 | ||||
| 30290 | 59 aa hypothetical protein | |||
| 30295 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco142ORF30295P | |
| 30300 | 73 aa hypothetical protein | |||
| plasmid pTA142-2 | ||||
| 29455 | group II intron reverse transcriptase/maturase | |||
| 29460 | M | M.EcoF113ORF26735P (99% identity) | M.Eco142ORF29460P | |
| 29465 | 73 aa hypothetical protein | |||
| plasmid pTA142-3 | ||||
| 28915 | 101 aa hypothetical protein | |||
| 28920 | M | M.Eco10466ORF27595P (100% identity) | M.Eco142ORF28920P | |
| 28925 | 73 aa hypothetical protein | |||