Actinobacillus pleuropneumoniae serovar 9 CVJ13261 |
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Putative Actinobacillus pleuropneumoniae serovar 9 CVJ13261 RM systems
Ref: Xu,Z. et al. J. Bacteriol. (2010) In press
REBASE ref # 12330
Contig set: 2,263,394 bp
GenBank #: ADOI00000000
REBASE acronym: Apl9
Org_num: 6527
All begin appser9_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3090 | DNA gyrase subunit A | |||
| 3100 | M | M.AplS4074ORF1505P (100% identity) | M.Apl9ORF3100P | |
| 3110 | 54 aa hypothetical protein | |||
| 3120 | 47 aa hypothetical protein | |||
| 3130 | S | S.AplS4074ORF1505P (100% identity) | S.Apl9ORF3100P | |
| 3140 | pseudogene | |||
| 3160 | R | AplS4074ORF1505P (100% identity) | Apl9ORF3100P | |
| 3170 | ABC transporter ATP-binding protein uup-1 | |||
| 15460 | S | S2.Apl13261ORF8085P (33% identity) | S.Apl9ORF15460P | |
| 15470 | Glutathione synthetase | |||
| ??? | S | S2.AplS4074ORF8040P (31% identity) | S.Apl9ORFAP | |
| 21750 | Integrase | |||
| 21750 | Integrase | |||
| ??? | S | S1.AplS4074ORF8040P (38% identity) | S.Apl9ORFBP | |
| 21940 | Phosphatidylserine decarboxylase beta chain | |||
| 21950 | R | AplS4074ORF8040P (100% identity) | Apl9ORF21960P | |
| 21960 | M | M.AplS4074ORF8040P (100% identity) | M.Apl9ORF21960P | |
| 21970 | 331 aa Conserved hypothetical DNA binding protein | |||
| 21980 | S | S1.Apl56153ORF8115P (40% identity) | S.Apl9ORF21960P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2140 | Uncharacterized sodium-dependent transporter | |||
| 2150 | M | M.AplS4074ORF995P (100% identity) | GATC | M.Apl9ORF2150P |
| 2160 | 3-dehydroquinate synthase | |||
| 5320 | 73 aa hypothetical protein | |||
| 5330 | M | M.Apl8514aORF4570P (100% identity) | M.Apl9ORF5330P | |
| 5340 | C-5 cytosine-specific DNA methylase | |||
| 5460 | Predicted transcriptional regulator | |||
| 5470 | M | M.AplS4074ORF2685P (100% identity) | M.Apl9ORF5470P | |
| 5530 | 190 aa hypothetical protein | |||
| 5540 | M | M.AplS4074ORF2720P (100% identity) | GATC | M.Apl9ORF5540P |
| 5550 | 37 aa hypothetical protein | |||
| 10310 | 928 aa hypothetical protein | |||
| 10320 | M | M.AplS4074ORF5045P (100% identity) | M.Apl9ORF10320P | |
| 10330 | Hydrolase of the alpha/beta superfamily | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7660 | M | M.AplS4074ORF3750P (100% identity) | M.Apl9ORF7660P | |
| 7670 | Uncharacterized HTH-type transcriptional | |||
| 8770 | 587 aa hypothetical protein | |||
| 8780 | R | Apl11ORF8870P (50% identity) | Apl9ORF8780P | |
| ??? | R | AplS4074ORF4325P (47% identity) | Apl9ORF8820P | |
| 8820 | M | M.AplS4074ORF4325P (78% identity) | M.Apl9ORF8820P | |
| 8830 | M | Type III restriction-modification system | M.Apl9ORF8830P | |
| 8840 | tRNA (mo5U34)-methyltransferase | |||