Actinobacillus pleuropneumoniae serovar 6 Femo |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Actinobacillus pleuropneumoniae serovar 6 Femo RM systems
Ref: Zhan,B. et al. J. Bacteriol. 192 (21), 5846-5847 (2010)
REBASE ref # 12068
Contig set: 2,375,501 bp
GenBank #: ADXO00000000
REBASE acronym: Apl6
Org_num: 6392
All begin APP6_, appser6_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 949 | ABC transporter ATPase component | |||
| 950 | R | AplFemORF1505P (100% identity) | Apl6ORF956P | |
| 951 | anticodon nuclease | |||
| 952 | S | S.AplFemORF1505P (100% identity) | S.Apl6ORF956P | |
| 953 | 303 aa hypothetical protein | |||
| 954 | 22 aa hypothetical protein | |||
| 955 | 333 aa hypothetical protein | |||
| 956 | M | M.AplJORF298P (99% identity) | M.Apl6ORF956P | |
| 957 | DNA gyrase subunit A | |||
| 1995 | bifunctional glutamate--cysteine | |||
| 1996 | S | S1.Apl8405ORF7680P (83% identity) | S1.Apl6ORF2000P | |
| 1997 | integrase | |||
| 1998 | S | S2.Apl8405ORF7680P (66% identity) | S2.Apl6ORF2000P | |
| 1999 | DNA binding protein | |||
| 2000 | M | M.AplS4074ORF8040P (100% identity) | M.Apl6ORF2000P | |
| 2001 | R | AplFemORF8500P (100% identity) | Apl6ORF2000P | |
| 2002 | phosphatidylserine decarboxylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21920 | 135 aa hypothetical protein | |||
| 21930 | M | M.AplFemORF3055P (74% identity) | GATC | M.Apl6ORF714P |
| 21940 | replicative DNA helicase | |||
| 1867 | 3-dehydroquinate synthase | |||
| 1868 | M | M.AplS4074ORF995P (100% identity) | GATC | M.Apl6ORF1868P |
| 1869 | sodium-dependent transporter | |||
| 713 | 139 aa hypothetical protein | |||
| 714 | M | M.AplFemORF3055P (74% identity) | GATC | M.Apl6ORF714P |
| 715 | 455 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1706 | M | M.AplFemORF4110P (100% identity) | M.Apl6ORF1706P | |
| 1707 | xylose isomerase | |||
| 1801 | M | M.AplFemORF4110P (100% identity) | M.Apl6ORF1801P | |
| 1802 | R | AplFemORF4110P (99% identity) | Apl6ORF1801P | |
| 1803 | ATP-dependent helicase | |||
| 2207 | M | M.AplS4074ORF4325P (52% identity) | M.Apl6ORF2207P | |
| 2208 | R | AplFemORF4765P (100% identity) | Apl6ORF2207P | |
| 2209 | 587 aa hypothetical protein | |||
| 581 | 320 aa hypothetical protein | |||
| 582 | M | M.AplS1536ORF4055P (66% identity) | M.Apl6ORF582P | |
| 705 | HTH-type transcriptional regulator | |||
| 706 | M | M.AplFemORF4110P (100% identity) | M.Apl6ORF706P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3860 | NAD-dependent deacetylase sirtuin 5 | |||
| 3870 | R | Apl10MrrP (100% identity) | Apl6MrrP | |
| 3880 | 41 aa hypothetical protein | |||
| 906 | 60 aa hypothetical protein | |||
| 907 | R | Apl10MrrP (100% identity) | Apl6MrrP | |
| 908 | 291 aa hypothetical protein | |||
| 31 | 257 aa hypothetical protein | |||
| 32 | R | Apl4McrBP (85% identity) | Apl6McrBP | |
| 33 | bifunctional phosphoribosyl-AMP | |||