Actinobacillus pleuropneumoniae serovar 12 1096 |
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Putative Actinobacillus pleuropneumoniae serovar 12 1096 RM systems
Ref: Xu,Z. et al. J. Bacteriol. (2010) In press
REBASE ref # 12330
Contig set: 2,194,146 bp
GenBank #: ADOL00000000
REBASE acronym: Apl12
Org_num: 6530
All begin appser12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3210 | DNA gyrase subunit A | |||
| 3220 | M | M.Apl8329ORF1500P (100% identity) | M.Apl12ORF3220P | |
| 3230 | 333 aa hypothetical protein | |||
| 3240 | 303 aa hypothetical protein | |||
| 3250 | S | S.AplP1875ORF1515P (99% identity) | S.Apl12ORF3220P | |
| 3260 | Anticodon nuclease | |||
| 3310 | 67 aa hypothetical protein | |||
| 3320 | R | Apl8329ORF1500P (100% identity) | Apl12ORF3320P | |
| 3330 | ABC transporter ATP-binding protein uup-1 | |||
| 20650 | S | S1.AplS1536ORF7750P (42% identity) | S.Apl12ORF20670P | |
| 20660 | 331 aa Conserved hypothetical DNA binding protein | |||
| 20670 | M | M.AplS4074ORF8040P (100% identity) | M.Apl12ORF20670P | |
| 20680 | R | Apl8329ORF7290P (100% identity) | Apl12ORF20670P | |
| 20690 | Phosphatidylserine decarboxylase beta chain | |||
| 20800 | S | S2.AplWF83ORF9840P (38% identity) | S.Apl12ORF20800P | |
| 20810 | Phage integrase/recombinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2240 | Uncharacterized sodium-dependent transporter | |||
| 2250 | M | M.AplWF83ORF1005P (90% identity) | GATC | M.Apl12ORF2250P |
| 2260 | 3-dehydroquinate synthase | |||
| 13550 | 115 aa hypothetical protein | |||
| 13560 | M | M2.AplM62ORF5095P (100% identity) | GGATG | M1.Apl12ORF13560P |
| 13570 | M | M1.AplM62ORF5095P (100% identity) | GGATG | M2.Apl12ORF13560P |
| 13580 | R | AplM62ORF5095P (100% identity) | GGATG | Apl12ORF13560P |
| 13590 | Transposase | |||
| 17650 | DNA-directed RNA polymerase subunit beta | |||
| 17660 | M | M.Apl8514aORF9720P (100% identity) | GTYRAC | M.Apl12ORF17660P |
| 17670 | R | AplS1536ORF9170P (100% identity) | GTYRAC | Apl12ORF17660P |
| 17680 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7310 | 957 aa hypothetical protein | |||
| 7320 | R | Apl8329ORF3465P (77% identity) | Apl12ORF7320P | |
| 7330 | M | M.Apl8329ORF3465P (53% identity) | M.Apl12ORF7330P | |
| 7340 | Uncharacterized HTH-type transcriptional | |||
| 8580 | 587 aa hypothetical protein | |||
| 8590 | R | Apl8329ORF4130P (100% identity) | Apl12ORF8600P | |
| ??? | M | M.Apl8329ORF4130P (99% identity) | M.Apl12ORF8600P | |
| 8620 | tRNA (mo5U34)-methyltransferase | |||
| 20630 | R | Potential type III restriction enzyme | Apl12ORF20640P | |
| 20640 | M | M.Apl8329ORF3465P (36% identity) | M.Apl12ORF20640P | |