Actinobacillus pleuropneumoniae serovar 1 str. 4074 RZ |
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Putative Actinobacillus pleuropneumoniae serovar 1 str. 4074 RZ RM systems
Ref: Xu,Z. et al. J. Bacteriol. (2010) In press
REBASE ref # 12330
Contig set: 2,262,449 bp
GenBank #: ADOD00000000
REBASE acronym: Apl14074
Org_num: 11169
All begin appser1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15310 | S | S2.AplWF83ORF9840P (35% identity) | S.Apl14074ORF15310P | |
| 15320 | Glutathione synthetase | |||
| 21590 | S | S2.AplS4074ORF8040P (47% identity) | S.Apl14074ORF21610P | |
| 21600 | 331 aa Conserved hypothetical DNA binding protein | |||
| 21610 | M | M.AplS4074ORF8040P (100% identity) | M.Apl14074ORF21610P | |
| 21620 | R | AplS4074ORF8040P (100% identity) | Apl14074ORF21610P | |
| 21630 | Phosphatidylserine decarboxylase beta chain | |||
| 3090 | DNA gyrase subunit A | |||
| 3100 | M | M.AplS4074ORF1505P (100% identity) | M.Apl14074ORF3100P | |
| 3110 | 54 aa hypothetical protein | |||
| 3120 | 47 aa hypothetical protein | |||
| 3130 | S | S.AplS4074ORF1505P (100% identity) | S.Apl14074ORF3100P | |
| 3140 | pseudogene | |||
| 3160 | R | AplS4074ORF1505P (100% identity) | Apl14074ORF3100P | |
| 3170 | ABC transporter ATP-binding protein uup-1 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5340 | 46 aa hypothetical protein | |||
| 5350 | M | M1.AplS4074ORF2615P (100% identity) | M.Apl14074ORF5350P | |
| 5360 | C-5 cytosine-specific DNA methylase | |||
| 5480 | Predicted transcriptional regulator | |||
| 5490 | M | M.AplS4074ORF2685P (100% identity) | M.Apl14074ORF5490P | |
| 5500 | 536 aa hypothetical protein | |||
| 5550 | 190 aa hypothetical protein | |||
| 5560 | M | M.AplS4074ORF2720P (100% identity) | GATC | M.Apl14074ORF5560P |
| 5570 | 37 aa hypothetical protein | |||
| 2150 | Uncharacterized sodium-dependent transporter | |||
| 2160 | M | M.AplS4074ORF995P (100% identity) | GATC | M.Apl14074ORF2160P |
| 2170 | 3-dehydroquinate synthase | |||
| 10220 | 928 aa hypothetical protein | |||
| 10230 | M | M.AplS4074ORF5045P (100% identity) | M.Apl14074ORF10230P | |
| 10240 | Hydrolase of the alpha/beta superfamily | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7670 | M | M.AplS4074ORF3750P (100% identity) | M.Apl14074ORF7670P | |
| 7680 | Uncharacterized HTH-type transcriptional | |||
| 8740 | 587 aa hypothetical protein | |||
| ??? | R | AplS4074ORF4325P (100% identity) | Apl14074ORF8780P | |
| 8780 | M | M.AplS4074ORF4325P (100% identity) | M.Apl14074ORF8780P | |
| 8790 | tRNA (mo5U34)-methyltransferase | |||