Escherichia coli 144 |
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Putative Escherichia coli 144 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,504,979 bp | CP028603 |
| plasmid pTA144: | 95,648 bp | CP028606 |
REBASE acronym: EcoJB144
Org_num: 34483
All begin C9E68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25875 | DUF262 domain-containing protein | |||
| 25880 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoJB144ORF25885P |
| 25885 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoJB144ORF25885P |
| 25890 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoJB144ORF25885P |
| 25895 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2460 | protein DamX | |||
| 2465 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoJB144DamP |
| 2470 | ribulose-phosphate 3-epimerase | |||
| 3010 | DUF2556 domain-containing protein | |||
| 3015 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoJB144ORF3015P |
| 3020 | Fis family transcriptional regulator | |||
| 8130 | recombination protein NinB | |||
| 8135 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoJB144ORF8135P |
| 8140 | NinE family protein | |||
| 11495 | phosphohydrolase | |||
| 11500 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoJB144DcmP |
| 11505 | V | V.EcosPA8DcmP (100% identity) | V.EcoJB144DcmP | |
| 11510 | drug/metabolite exporter YedA | |||
| 14285 | TrmB family transcriptional regulator | |||
| 14290 | M | M.EcoZ1836ORF13250P (100% identity) | M.EcoJB144ORF14290P | |
| 14295 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 16400 | 61 aa hypothetical protein | |||
| 16415 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoJB144ORF16415P | |
| 16420 | lipoprotein | |||
| 24080 | LexA family transcriptional regulator | |||
| 24085 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoJB144ORF24085P |
| 24090 | PerC family transcriptional regulator | |||
| 26145 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoJB144ORF26145P |
| 26150 | ATP-dependent helicase | |||
| 26280 | 87 aa hypothetical protein | |||
| 26285 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.EcoJB144ORF26285P |
| 26290 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | EcoJB144ORF26285P |
| 26295 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.EcoJB144ORF26285P |
| 26300 | DUF4102 domain-containing protein | |||
| plasmid pTA144 | ||||
| 29975 | 101 aa hypothetical protein | |||
| 29980 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoJB144ORF29980P | |
| 29985 | 73 aa hypothetical protein | |||