Salmonella enterica subsp. enterica 16C0703578 |
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Putative Salmonella enterica subsp. enterica 16C0703578 RM systems
Ref: Schonfeld,J. et al. unpublished
REBASE ref # 28676
| Sequence length: | GenBank #: | |
| Chromosome: | 4,997,600 bp | CP039860 |
| plasmid p16-6773.1: | 245,375 bp | CP039861 |
| plasmid p16-6773.2: | 91,904 bp | CP039862 |
REBASE acronym: Sen3578
Org_num: 34553
All begin E5O17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24415 | endoribonuclease SymE | |||
| 24420 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen3578ORF24425P |
| 24425 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen3578ORF24425P |
| 24430 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen3578ORF24425P |
| 24435 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10160 | drug/metabolite exporter YedA | |||
| 10165 | V | V.StyUK1DcmP (100% identity) | V.Sen3578DcmP | |
| 10170 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen3578DcmP |
| 10175 | phosphohydrolase | |||
| 10435 | RusA family crossover junction | |||
| 10440 | M | M.Ssp17155ORFIP (100% identity) | M.Sen3578ORF10440P | |
| 10445 | PerC family transcriptional regulator | |||
| 13810 | 0 aa hypothetical protein | |||
| 13815 | M | M.StyTORF1914P (100% identity) | M.Sen3578ORF13815P | |
| 13820 | ead/Ea22-like family protein | |||
| 14315 | AraC family transcriptional regulator | |||
| 14320 | M | M.StyCORF187P (49% identity) | M.Sen3578ORF14320P | |
| 14325 | thermonuclease family protein | |||
| 16930 | replication endonuclease | |||
| 16935 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen3578ORF16935P | |
| 16940 | DUF2732 family protein | |||
| 17860 | DNA-binding transcriptional regulator Fis | |||
| 17865 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen3578ORF17865P |
| 17870 | DUF2556 domain-containing protein | |||
| 18355 | ribulose-phosphate 3-epimerase | |||
| 18360 | M | M.StyTDamP (100% identity) | GATC | M.Sen3578DamP |
| 18365 | cell division protein DamX | |||
| 22320 | PerC family transcriptional regulator | |||
| 22325 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen3578ORF22325P |
| 22330 | LexA family transcriptional regulator | |||
| 24265 | ATP-binding protein | |||
| 24270 | RM | StyUK1IV (100% identity) | GATCAG | Sen3578ORF24270P |
| 24275 | BREX system P-loop protein BrxC | |||
| plasmid p16-6773.1 | ||||
| 25290 | thermonuclease family protein | |||
| 25295 | M | M.YpsF1ORFCP (100% identity) | M.Sen3578ORF25295P | |
| 25300 | DUF1173 domain-containing protein | |||
| 25820 | 108 aa hypothetical protein | |||
| 25825 | M | M.YpsF1ORFBP (100% identity) | M.Sen3578ORF25825P | |
| 25830 | 202 aa hypothetical protein | |||
| 25980 | DNA-binding protein | |||
| 25985 | M | M.YpsF1ORFDP (100% identity) | M.Sen3578ORF25985P | |
| 25990 | 284 aa hypothetical protein | |||
| plasmid p16-6773.2 | ||||
| 26510 | 63 aa hypothetical protein | |||
| 26525 | M | M.Sen9860ORF25540P (100% identity) | M.Sen3578ORF26525P | |
| 26530 | recombination-associated protein RdgC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1925 | MFS transporter | |||
| 1930 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen3578ORF1930P |
| 1935 | R | StyUK1IP (99% identity) | CAGAG | Sen3578ORF1930P |
| 1940 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24430 | type I restriction-modification system | |||
| 24435 | R | StyUK1MrrP (100% identity) | Sen3578MrrP | |
| 24440 | BrnT family toxin | |||