Escherichia coli O157:H7 FWSEC0004 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 FWSEC0004 RM systems
Ref: Tyson,S. et al. unpublished
REBASE ref # 28572
| Sequence length: | GenBank #: | |
| Chromosome: | 5,406,250 bp | CP031913 |
| plasmid unnamed13: | 92,754 bp | CP031914 |
REBASE acronym: Eco0004
Org_num: 34305
All begin CAM50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25100 | DUF262 domain-containing protein | |||
| 25105 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco0004ORF25110P |
| 25110 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco0004ORF25110P |
| 25115 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco0004ORF25110P |
| 25120 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2225 | protein DamX | |||
| 2230 | M | DNA adenine methylase | GATC | M.Eco0004DamP |
| 2235 | ribulose-phosphate 3-epimerase | |||
| 2775 | DUF2556 domain-containing protein | |||
| 2780 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco0004ORF2780P |
| 2785 | Fis family transcriptional regulator | |||
| 9105 | recombination protein NinB | |||
| 9110 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco0004ORF9110P |
| 9115 | NinE family protein | |||
| 10620 | phosphohydrolase | |||
| 10625 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco0004DcmP |
| 10630 | V | V.EcosPA8DcmP (100% identity) | V.Eco0004DcmP | |
| 10635 | drug/metabolite exporter YedA | |||
| 13935 | 81 aa hypothetical protein | |||
| 13940 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco0004ORF13940P | |
| 13945 | 329 aa hypothetical protein | |||
| 15210 | 61 aa hypothetical protein | |||
| 15225 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco0004ORF15225P | |
| 15230 | lipoprotein | |||
| 18340 | NinE family protein | |||
| 18345 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco0004ORF18345P |
| 18350 | recombination protein NinB | |||
| 25365 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco0004ORF25365P |
| 25370 | DEAD/DEAH box helicase | |||
| plasmid unnamed13 | ||||
| 29010 | 59 aa hypothetical protein | |||
| 29015 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco0004ORF29015P | |
| 29020 | 73 aa hypothetical protein | |||