Salmonella enterica subsp. enterica serovar Worthington 7102.58 |
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Putative Salmonella enterica subsp. enterica serovar Worthington 7102.58 RM systems
Ref: Clement,M. et al. unpublished
REBASE ref # 28603
| Sequence length: | GenBank #: | |
| Chromosome: | 4,882,236 bp | CP039509 |
| plasmid p7102_58-6: | 81,615 bp | CP039513 |
REBASE acronym: Sen0258
Org_num: 34402
All begin FAF09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20625 | restriction endonuclease | |||
| 20630 | R | SenSW70ORF19425P (100% identity) | CGCANNNNNNNNTCNG | Sen0258ORF20635P |
| 20635 | M | M.SenSW70ORF19425P (100% identity) | CGCANNNNNNNNTCNG | M.Sen0258ORF20635P |
| 20640 | S | S.SenSW70ORF19425P (100% identity) | CGCANNNNNNNNTCNG | S.Sen0258ORF20635P |
| 20645 | 64 aa hypothetical protein | |||
| 20860 | DUF945 domain-containing protein | |||
| 20865 | R | SenSW70ORF19650P (100% identity) | TTANNNNNNNTGGG | Sen0258ORF20845P |
| 20870 | M | M.SenSW70ORF19650P (100% identity) | TTANNNNNNNTGGG | M.Sen0258ORF20845P |
| 20875 | S | S.SenSW70ORF19650P (100% identity) | TTANNNNNNNTGGG | S.Sen0258ORF20845P |
| 20880 | 355 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1895 | cell division protein DamX | |||
| 1900 | M | M.SenSW70DamP (100% identity) | GATC | M.Sen0258DamP |
| 1905 | ribulose-phosphate 3-epimerase | |||
| 2385 | DUF2556 domain-containing protein | |||
| 2390 | M | M.SenSW70ORF2260P (100% identity) | ATGCAT | M.Sen0258ORF2390P |
| 2395 | DNA-binding transcriptional regulator Fis | |||
| 7585 | DUF4222 domain-containing protein | |||
| 7590 | M | M.Sen7830ORF20120P (100% identity) | M.Sen0258ORF7590P | |
| 7595 | TraR/DksA family transcriptional regulator | |||
| 7595 | TraR/DksA family transcriptional regulator | |||
| 7600 | M | M2.SenRM074ORF7060P (100% identity) | M.Sen0258ORF7600P | |
| 7605 | 94 aa hypothetical protein | |||
| 10035 | phosphohydrolase | |||
| 10040 | M | M.SenSW70Dcm2P (100% identity) | CCWGG | M.Sen0258DcmP |
| 10045 | V | very short patch repair endonuclease | V.Sen0258DcmP | |
| 10050 | drug/metabolite exporter YedA | |||
| 14320 | RusA family crossover junction | |||
| 14325 | M | M.SenST224ORF7170P (100% identity) | M.Sen0258ORF14325P | |
| 14330 | PerC family transcriptional regulator | |||
| plasmid p7102_58-6 | ||||
| 24420 | 59 aa hypothetical protein | |||
| 24425 | M | M.Xca80ORFEP (100% identity) | M.Sen0258ORF24425P | |
| 24430 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18355 | 33 aa hypothetical protein | |||
| 18360 | R | SenWC80ORFAP (99% identity) | CAGAG | Sen0258ORF18365P |
| 18365 | M | M.SenSW70ORF17195P (100% identity) | CAGAG | M.Sen0258ORF18365P |
| 18370 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20620 | BrnT family toxin | |||
| 20625 | R | StyTMrrP (100% identity) | Sen0258MrrP | |
| 20630 | type I restriction-modification system | |||