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Putative Desulfobacteraceae bacterium Eth-SRB1 RM systems
Ref: Chen,S.-C. et al. Nature (2019)
REBASE ref # 28513
GenBank #: RPGP00000000
REBASE acronym: DbaSRB1
Org_num: 34087
All begin SRB1_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1439 | 104 aa hypothetical protein | |||
1440 | M | M.DspBuS5ORF585P (82% identity) | M.DbaSRB1ORF1440P | |
1441 | 358 aa hypothetical protein | |||
1442 | 43 aa hypothetical protein | |||
1443 | 82 aa hypothetical protein | |||
1444 | S | S.Msp14BORFCP (47% identity) | S.DbaSRB1ORF1440P | |
1445 | ATP-dependent endonuclease of the OLD | |||
1446 | DNA helicase II / ATP-dependent DNA helicase | |||
1447 | 42 aa hypothetical protein | |||
1448 | 342 aa hypothetical protein | |||
1449 | R | PspSCADCORF205255P (78% identity) | DbaSRB1ORF1440P | |
1450 | 136 aa hypothetical protein | |||
2176 | 87 aa hypothetical protein | |||
2177 | R | DspBuS5ORF2510P (88% identity) | DbaSRB1ORF2181P | |
2178 | S | S.Nsp9414ORF29130P (37% identity) | S.DbaSRB1ORF2181P | |
2179 | 82 aa hypothetical protein | |||
2180 | 344 aa hypothetical protein | |||
??? | M | M.DspBuS5ORF2510P (71% identity) | M.DbaSRB1ORF2181P | |
2183 | lipopolysaccharide export system permease | |||
592 | 332 aa hypothetical protein | |||
593 | S | S.AflORF16945P (47% identity) | S2.DbaSRB1ORF595P | |
594 | 366 aa hypothetical protein | |||
595 | M | M.RspOXR11ORF18500P (67% identity) | M.DbaSRB1ORF595P | |
596 | R | AcoA42IP (59% identity) | DbaSRB1ORF595P | |
597 | 284 aa hypothetical protein | |||
756 | 190 aa hypothetical protein | |||
757 | R | 85 aa hypothetical protein | DbaSRB1ORF759P | |
758 | S | S.MkoLM6ORF4387P (58% identity) | S.DbaSRB1ORF759P | |
759 | M | type I restriction enzyme M protein | M.DbaSRB1ORF759P | |
760 | monovalent cation:H+ antiporter-2, CPA2 family | |||
829 | 267 aa hypothetical protein | |||
830 | S | S2.Bsp10303ORFAP (43% identity) | S.DbaSRB1ORF830P | |
831 | 155 aa hypothetical protein | |||
893 | 133 aa hypothetical protein | |||
894 | R | CspAM553ORF11125P (60% identity) | DbaSRB1ORF895P | |
895 | M | M.TsyCad16ORFMP (42% identity) | M.DbaSRB1ORF895P | |
896 | 407 aa hypothetical protein | |||
940 | 1018 aa hypothetical protein | |||
941 | M | M.PspNL19ORF23900P (78% identity) | M.DbaSRB1ORF941P | |
942 | S | S.Csp295ORF5005P (33% identity) | S1.DbaSRB1ORF941P | |
943 | 511 aa hypothetical protein | |||
944 | 269 aa hypothetical protein | |||
945 | S | 71 aa hypothetical protein | S2.DbaSRB1ORF941P | |
946 | S | S1.QauD9ORF5750P (62% identity) | S3.DbaSRB1ORF941P | |
947 | R | PspIBORF6372P (72% identity) | DbaSRB1ORF941P | |
948 | uncharacterized protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1147 | RM | Mha6AcORF1682P (33% identity) | DbaSRB1ORF1147P | |
1148 | DNA excision repair protein ERCC-2 | |||
1390 | 220 aa hypothetical protein | |||
1391 | R | Dli5ac10ORF49580P (70% identity) | DbaSRB1ORF1392P | |
1392 | M | M.SspADCORF10265P (48% identity) | M.DbaSRB1ORF1392P | |
1393 | 120 aa hypothetical protein | |||
1545 | phosphoribosylglycinamide formyltransferase 1 | |||
1546 | RM | MboBA1ORF651P (62% identity) | DbaSRB1ORF1546P | |
1547 | 118 aa hypothetical protein | |||
2237 | 157 aa hypothetical protein | |||
2238 | M | M.AbaOC070ORFHP (50% identity) | M.DbaSRB1ORF2238P | |
2239 | R | AfeV8ORF5215P (75% identity) | DbaSRB1ORF2238P | |
2240 | 346 aa hypothetical protein | |||
382 | 130 aa hypothetical protein | |||
383 | R | MspR50ORF4750P (64% identity) | DbaSRB1ORF384P | |
384 | M | M.Hfl51ORFDP (67% identity) | M.DbaSRB1ORF384P | |
385 | multiple antibiotic resistance protein | |||
393 | 184 aa hypothetical protein | |||
394 | R | Aba57ORF12515P (60% identity) | DbaSRB1ORF395P | |
395 | M | M.Aba57ORF12515P (74% identity) | M.DbaSRB1ORF395P | |
396 | 80 aa hypothetical protein | |||
2329 | adenine-specific DNA-methyltransferase | |||
2330 | V | V.ObaTAV1ORF2988P (43% identity) | V.DbaSRB1ORF2332P | |
2331 | R | Dbazrk40ORF9600P (51% identity) | DbaSRB1ORF2332P | |
2332 | M | M.BspNSP21ORFDP (60% identity) | M.DbaSRB1ORF2332P | |
2333 | 98 aa hypothetical protein | |||
473 | 225 aa hypothetical protein | |||
474 | RM | DbaSRB2ORF1495P (69% identity) | DbaSRB1ORF474P | |
475 | adenine-specific DNA-methyltransferase | |||
822 | 153 aa hypothetical protein | |||
823 | M | M.Vba44730ORF4515P (35% identity) | M.DbaSRB1ORF823P | |
824 | 110 aa hypothetical protein | |||
825 | restriction endonuclease | |||
826 | R | Vba44730ORF4515P (30% identity) | DbaSRB1ORF823P | |
827 | V | V.PbaCA11ORF53050P (64% identity) | V.DbaSRB1ORF823P | |
828 | 126 aa hypothetical protein | |||
2796 | 154 aa hypothetical protein | |||
2797 | R | Lsp902ORF22230P (60% identity) | DbaSRB1ORF2798P | |
2798 | M | M.PprC007ORFFP (54% identity) | M.DbaSRB1ORF2798P | |
2799 | 195 aa hypothetical protein | |||
2816 | 275 aa hypothetical protein | |||
2817 | M | M.AspCfxKORF595P (40% identity) | M.DbaSRB1ORF2817P | |
2818 | uncharacterized protein | |||
931 | dTDP-glucose 4,6-dehydratase | |||
932 | M | M.Gsp8ORF19210P (65% identity) | M.DbaSRB1ORF932P | |
933 | 55 aa hypothetical protein | |||
2960 | 143 aa hypothetical protein | |||
2961 | R | DspN47ORF44340P (77% identity) | DbaSRB1ORF2962P | |
2962 | M | M.Mme286ORFRP (83% identity) | M.DbaSRB1ORF2962P | |
2963 | 85 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
273 | 86 aa hypothetical protein | |||
274 | R | KstMBR1ORF3727P (73% identity) | DbaSRB1ORF275P | |
275 | M | M.Gth11263ORF4825P (70% identity) | M.DbaSRB1ORF275P | |
276 | 212 aa hypothetical protein | |||
300 | 349 aa hypothetical protein | |||
301 | M | M.TdeDORF1491P (57% identity) | M.DbaSRB1ORF301P | |
302 | 300 aa hypothetical protein | |||
303 | 56 aa hypothetical protein | |||
304 | 218 aa hypothetical protein | |||
305 | R | DspBuS5ORF1383P (86% identity) | DbaSRB1ORF301P | |
306 | 120 aa hypothetical protein | |||
2328 | 54 aa hypothetical protein | |||
2329 | M | M.DbaSRB2ORF3498P (72% identity) | M.DbaSRB1ORF2329P | |
2330 | DNA mismatch endonuclease, patch repair protein | |||
471 | 611 aa hypothetical protein | |||
472 | R | SspD17ORF4920P (68% identity) | DbaSRB1ORF475P | |
473 | 225 aa hypothetical protein | |||
474 | 1033 aa hypothetical protein | |||
475 | M | M.RspB4ORF17485P (59% identity) | M.DbaSRB1ORF475P | |
476 | 107 aa hypothetical protein | |||
2377 | 177 aa hypothetical protein | |||
2378 | M | M.DbaSRB1ORF301P (31% identity) | M.DbaSRB1ORF2378P | |
2379 | 157 aa hypothetical protein | |||
2383 | 845 aa hypothetical protein | |||
2384 | M | M.Mst26271ORF1210P (52% identity) | M.DbaSRB1ORF2384P | |
2385 | DNA repair protein RadC | |||
885 | 107 aa hypothetical protein | |||
886 | M | M.DbaSRB2ORF1602P (84% identity) | M.DbaSRB1ORF886P | |
887 | ATP-dependent DNA helicase RecG | |||
888 | R | DspBuS5ORF451P (95% identity) | DbaSRB1ORF886P | |
889 | glucosamine---fructose-6-phosphate |