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Putative Salmonella enterica subsp. enterica serovar Senftenberg CFSAN004025 RM systems
Ref: Robertson,J. et al. unpublished
REBASE ref # 28588
Sequence length: | GenBank #: | |
Chromosome: | 4,905,224 bp | CP039270 |
plasmid pCFSAN004025.1: | 324,175 bp | CP039271 |
REBASE acronym: Sen4025
Org_num: 34393
All begin CFSAN004025_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5585 | 291 aa hypothetical protein | |||
5590 | M | M.SenS12VPHORF19925P (100% identity) | M.Sen4025ORF5590P | |
5595 | S | S.SenS12VPHORF19925P (100% identity) | S.Sen4025ORF5590P | |
5600 | DUF91 domain-containing protein | |||
5605 | R | SenS12VPHORF19925P (100% identity) | Sen4025ORF5590P | |
5610 | cell filamentation protein Fic | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1980 | cell division protein DamX | |||
1985 | M | M.StyTDamP (100% identity) | GATC | M.Sen4025DamP |
1990 | ribulose-phosphate 3-epimerase | |||
2470 | DUF2556 domain-containing protein | |||
2475 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4025ORF2475P |
2480 | DNA-binding transcriptional regulator Fis | |||
3645 | DEAD/DEAH box helicase | |||
3650 | RM | Sma1978ORFHP (99% identity) | CTTGAC | Sen4025ORF3650P |
3655 | transposase | |||
7740 | DUF4222 domain-containing protein | |||
7745 | M | M.SenSS209ORF4411P (100% identity) | M.Sen4025ORF7745P | |
7750 | TraR/DksA family transcriptional regulator | |||
7750 | TraR/DksA family transcriptional regulator | |||
7755 | M | M.SenSS209ORF4413P (100% identity) | M.Sen4025ORF7755P | |
7760 | 94 aa hypothetical protein | |||
14915 | drug/metabolite exporter YedA | |||
14920 | V | V.StyUK1DcmP (100% identity) | V.Sen4025DcmP | |
14925 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen4025DcmP |
14930 | phosphohydrolase | |||
15580 | 83 aa hypothetical protein | |||
15585 | M | M.SenYU39ORF2843P (100% identity) | M.Sen4025ORF15585P | |
15590 | 260 aa hypothetical protein | |||
plasmid pCFSAN004025.1 | ||||
25390 | DUF1173 family protein | |||
25395 | M | M.Ssp15303DcmP (100% identity) | M.Sen4025Dcm2P | |
25400 | nuclease | |||
26050 | 106 aa hypothetical protein | |||
26055 | M | M.Ssp15303ORFDP (100% identity) | M.Sen4025ORF26055P | |
26060 | 202 aa hypothetical protein | |||
26185 | DNA-binding protein | |||
26190 | M | M.Ssp15303ORFEP (100% identity) | M.Sen4025ORF26190P | |
26195 | 284 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3465 | inovirus Gp2 family protein | |||
3470 | R | SenLASSORF19350P (100% identity) | Sen4025ORF3475P | |
3475 | M | M.Sen5006ORF16245P (100% identity) | M.Sen4025ORF3475P | |
3480 | Cd(II)/Pb(II)-responsive transcriptional | |||
18685 | 33 aa hypothetical protein | |||
18690 | R | StyUK1IP (99% identity) | CAGAG | Sen4025ORF18695P |
18695 | M | M.SspZ54ORF15425P (100% identity) | CAGAG | M.Sen4025ORF18695P |
18700 | MFS transporter |