Haemophilus parahaemolyticus NEB129 |
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Putative Haemophilus parahaemolyticus NEB129 RM systems
Ref: Fomenkov,A. et al. unpublished
REBASE ref # 28637
Complete sequence: 2,090,133 bp
GenBank #: CP038817
REBASE acronym: Hha
Org_num: 1478
All begin E5Q53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 970 | mobilization protein | |||
| 975 | R | Hpa8479ORF611P (95% identity) | HhaORF990P | |
| 980 | 449 aa hypothetical protein | |||
| 985 | S | S.Hpa8479ORF611P (100% identity) | S.HhaORF990P | |
| 990 | M | M.Hpa8479ORF611P (100% identity) | M.HhaORF990P | |
| 995 | 96 aa hypothetical protein | |||
| 1910 | CDP-diacylglycerol--glycerol-3-phosphate | |||
| 1915 | R | Hpa8479ORF419P (100% identity) | TTANNNNNNNTCG | HhaIVP |
| 1920 | FRG domain-containing protein | |||
| 1925 | S | S.Hpa8479ORF419P (100% identity) | TTANNNNNNNTCG | S.HhaIV |
| 1930 | M | M.Hpa1199ORF3930P (98% identity) | TTANNNNNNNTCG | M.HhaIV |
| 1935 | 3-phosphoserine/phosphohydroxythreonine | |||
| 6310 | DNA polymerase III subunit delta | |||
| 6315 | R | Hpa8479ORF1592P (100% identity) | GGANNNNNNRTAY | HhaVP |
| 6320 | hydroxyacid dehydrogenase | |||
| 6325 | anticodon nuclease | |||
| 6330 | restriction endonuclease subunit S | |||
| 6335 | 172 aa hypothetical protein | |||
| 6340 | M | M.Hpa8479ORF1592P (100% identity) | GGANNNNNNRTAY | M.HhaV |
| 6345 | transcriptional regulator AsnC | |||
| 9450 | site-specific integrase | |||
| 9455 | R | Hpa8479ORF958P (100% identity) | ACCNNNNNGGT | HhaVIP |
| 9460 | S | S2.Hpa1199ORF1275P (91% identity) | S2.HhaVIP | |
| 9465 | S | S1.Hpa1199ORF1275P (100% identity) | ACCNNNNNGGT | S1.HhaVI |
| 9470 | M | M.Hpa8479ORF958P (100% identity) | ACCNNNNNGGT | M.HhaVI |
| 9475 | acetyl-CoA carboxylase, carboxyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 745 | 73 aa hypothetical protein | |||
| 750 | M | M.Hpa1199ORF2735P (100% identity) | M.HhaORF750P | |
| 755 | replication endonuclease | |||
| 1580 | DNA polymerase I | |||
| 1585 | S | S.Hpa8479ORF486P (100% identity) | S.HhaORF1590P | |
| 1590 | RM | Hpa8479ORF486P (100% identity) | HhaORF1590P | |
| 1595 | tryptophan synthase subunit alpha | |||
| 6515 | 1,4-dihydroxy-2-naphthoyl-CoA synthase | |||
| 6520 | M | M.Hpa8479I (100% identity) | GANTC | M.HhaII |
| 6525 | R | Hpa8479IP (100% identity) | GANTC | HhaII |
| 6530 | penicillin-binding protein 1B | |||
| 7165 | arginine ABC transporter ATP-binding protein | |||
| 7170 | R | Hpa8479ORF1427P (100% identity) | GCGC | HhaI |
| 7175 | M | M.Hpa8479ORF1427P (100% identity) | GCGC | M.HhaI |
| 7180 | XRE family transcriptional regulator | |||
| 9025 | hydroxyethylthiazole kinase | |||
| 9030 | M | M.Hpa1199ORF825P (100% identity) | M.HhaORF9030P | |
| 9035 | integrase | |||
| 10195 | YoaH family protein | |||
| 5 | M | M.Hpa8479ORF811P (100% identity) | M.HhaORF5P | |
| 10 | leucine-rich repeat domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 455 | DEAD/DEAH box helicase | |||
| 460 | R | Hpa8479ORF718P (100% identity) | HhaORF465P | |
| 465 | M | M.Hpa1199ORF2450P (100% identity) | M.HhaORF465P | |
| 470 | translation initiation factor IF-2 | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8265 | AI-2E family transporter | |||
| 8270 | M | M.Hpa8479ORF1208P (100% identity) | GATC | M.HhaIII |
| 8275 | 3-dehydroquinate synthase | |||