Salmonella enterica subsp. enterica serovar Senftenberg SA20130280 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Senftenberg SA20130280 RM systems
Ref: Robertson,J. et al. unpublished
REBASE ref # 28588
Complete sequence: 4,830,242 bp
GenBank #: CP038593
REBASE acronym: Sen0280
Org_num: 34397
All begin E5F22_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5360 | phosphohydrolase | |||
| 5365 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen0280DcmP |
| 5370 | V | very short patch repair endonuclease | V.Sen0280DcmP | |
| 5375 | drug/metabolite exporter YedA | |||
| 17195 | DNA-binding transcriptional regulator Fis | |||
| 17200 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen0280ORF17200P |
| 17205 | DUF2556 domain-containing protein | |||
| 17685 | ribulose-phosphate 3-epimerase | |||
| 17690 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen0280DamP |
| 17695 | cell division protein DamX | |||
| 23190 | 97 aa hypothetical protein | |||
| 23195 | R | SenS0991ORF3040P (100% identity) | Sen0280ORF23195P | |
| 23200 | DNA cytosine methyltransferase | |||
| 23195 | restriction endonuclease | |||
| 23200 | M | M.SenSS209ORF3569P (100% identity) | M.Sen0280ORF23200P | |
| 23205 | sensor histidine kinase | |||
| 23235 | anaerobic sulfatase maturase | |||
| 23240 | R | SenSS209ORF3560P (100% identity) | CCWGG | Sen0280ORF23245P |
| 23245 | M | M.SenSS209ORF3560P (100% identity) | CCWGG | M.Sen0280ORF23245P |
| 23250 | Crp/Fnr family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1920 | MFS transporter | |||
| 1925 | M | M.SspZ54ORF15425P (100% identity) | CAGAG | M.Sen0280ORF1925P |
| 1930 | R | StyUK1IP (99% identity) | CAGAG | Sen0280ORF1925P |
| 1935 | 33 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13725 | replication endonuclease | |||
| 13730 | M | M.SenW714ORF5945P (100% identity) | M.Sen0280ORF13730P | |
| 13735 | 3-5 exonuclease | |||