Escherichia coli 28Eco12 |
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Putative Escherichia coli 28Eco12 RM systems
Ref: Abril,D.J. et al. unpublished
REBASE ref # 28564
| Sequence length: | GenBank #: | |
| Chromosome: | 5,343,367 bp | CP038505 |
| plasmid p28Eco12: | 92,027 bp | CP038506 |
REBASE acronym: Eco2812
Org_num: 34286
All begin DC440_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 455 | protein cII | |||
| 460 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | Eco2812ORF465P |
| 465 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco2812ORF465P |
| 470 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco2812ORF465P |
| 475 | 563 aa hypothetical protein | |||
| 22180 | restriction endonuclease | |||
| 22185 | M | M.Ecost88ORF20845P (100% identity) | M.Eco2812ORF22185P | |
| 22190 | S | S.Ecost88ORF20845P (100% identity) | S.Eco2812ORF22185P | |
| 22195 | R | Ecost88ORF20845P (100% identity) | Eco2812ORF22185P | |
| 22200 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2315 | cell division protein DamX | |||
| 2320 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2812DamP |
| 2325 | ribulose-phosphate 3-epimerase | |||
| 2860 | DUF2556 domain-containing protein | |||
| 2865 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco2812ORF2865P |
| 2870 | DNA-binding transcriptional regulator Fis | |||
| 10120 | HD domain-containing protein | |||
| 10125 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco2812DcmP |
| 10130 | V | V.SflSTLE3DcmP (100% identity) | V.Eco2812DcmP | |
| 10135 | drug/metabolite exporter YedA | |||
| 14445 | DUF3927 domain-containing protein | |||
| 14460 | M | M.Sso1093ORF10290P (100% identity) | A | M.Eco2812ORF14460P |
| 14465 | TrmB family transcriptional regulator | |||
| plasmid p28Eco12 | ||||
| 26875 | recombination-associated protein RdgC | |||
| 26880 | M | M.Sen94620ORF28085P (100% identity) | M.Eco2812ORF26880P | |
| 26895 | 61 aa hypothetical protein | |||