Salmonella enterica subsp. enterica serovar Typhimurium E40 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium E40 RM systems
Ref: Wahlig,T.A. et al. unpublished
REBASE ref # 28602
| Sequence length: | GenBank #: | |
| Chromosome: | 4,890,368 bp | CP038432 |
| plasmid unnamed: | 94,009 bp | CP038433 |
REBASE acronym: SenTE40
Org_num: 34399
All begin E4W07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17435 | endoribonuclease SymE | |||
| 17440 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenTE40ORF17445P |
| 17445 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenTE40ORF17445P |
| 17450 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenTE40ORF17445P |
| 17455 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3235 | PerC family transcriptional regulator | |||
| 3240 | M | M.StyUK1V (100% identity) | GATC | M.SenTE40ORF3240P |
| 3245 | RusA family crossover junction | |||
| 3485 | phosphohydrolase | |||
| 3490 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenTE40DcmP |
| 3495 | V | V.StyUK1DcmP (100% identity) | V.SenTE40DcmP | |
| 3500 | drug/metabolite exporter YedA | |||
| 11560 | DNA-binding transcriptional regulator Fis | |||
| 11565 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenTE40ORF11565P |
| 11570 | DUF2556 domain-containing protein | |||
| 12055 | ribulose-phosphate 3-epimerase | |||
| 12060 | M | M.StyTDamP (100% identity) | GATC | M.SenTE40DamP |
| 12065 | cell division protein DamX | |||
| 17280 | ATP-binding protein | |||
| 17285 | RM | StyUK1IV (100% identity) | GATCAG | SenTE40ORF17285P |
| 17290 | BREX system P-loop protein BrxC | |||
| 24430 | ead/Ea22-like family protein | |||
| 24435 | M | M.Sens29958ORF6205P (100% identity) | M.SenTE40ORF24435P | |
| 24440 | DUF550 domain-containing protein | |||
| plasmid unnamed | ||||
| 24810 | 62 aa hypothetical protein | |||
| 24815 | M | M.StyUK1ORFAP (100% identity) | M.SenTE40ORF24815P | |
| 24820 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19660 | MFS transporter | |||
| 19665 | M | M.StyUK1I (100% identity) | CAGAG | M.SenTE40ORF19665P |
| 19670 | R | StyUK1IP (99% identity) | CAGAG | SenTE40ORF19665P |
| 19675 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17450 | type I restriction-modification system | |||
| 17455 | R | StyUK1MrrP (100% identity) | SenTE40MrrP | |
| 17460 | BrnT family toxin | |||