Rhodocyclaceae bacterium SHINM1 |
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Putative Rhodocyclaceae bacterium SHINM1 RM systems
Ref: Watanabe,K. unpublished
REBASE ref # 28595
Complete sequence: 2,295,374 bp
GenBank #: AP019011
REBASE acronym: RbaNM1
Org_num: 34355
All begin SHINM1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13070 | UPF0016 family membrane protein | |||
| 13080 | R | RbaJ1ORF8550P (100% identity) | RbaNM1ORF1556P | |
| 13090 | 46 aa hypothetical protein | |||
| 13100 | 63 aa hypothetical protein | |||
| 13110 | Fic family protein | |||
| 13120 | S | S.RbaJ1ORF8550P (100% identity) | S.RbaNM1ORF1556P | |
| 13130 | M | M.RbaJ1ORF8550P (100% identity) | M.RbaNM1ORF1556P | |
| 13140 | 325 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9430 | transcriptional regulator | |||
| 9440 | RM | RbaAU1ORF16890P (100% identity) | RbaNM1ORF9440P | |
| 9450 | 568 aa hypothetical protein | |||
| 1935 | potassium transporter peripheral membrane | |||
| 1936 | RM | RbaNM1ORF9440P (98% identity) | RbaNM1ORF1936P | |
| 1937 | helix-turn-helix protein | |||
| 21840 | response regulator | |||
| 21850 | RM | RbaJ1ORF23640P (100% identity) | RbaNM1ORF666P | |
| 21860 | 2-hydroxyacid dehydrogenase | |||
| 22450 | 51 aa hypothetical protein | |||
| 22460 | RM | RbaJ1ORF23030P (100% identity) | RbaNM1ORF607P | |
| 22470 | 333 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2850 | 181 aa hypothetical protein | |||
| 2860 | M | M.Rba558ORF5200P (54% identity) | M.RbaNM1ORF283P | |
| 2870 | R | Rba558ORF5200P (55% identity) | RbaNM1ORF283P | |
| 2880 | 354 aa hypothetical protein | |||
| 13900 | integrase | |||
| 13910 | R | AspNO1ORF22341P (70% identity) | RbaNM1ORF1479P | |
| 13920 | M | M.Ain62X4ORF12300P (66% identity) | M.RbaNM1ORF1479P | |
| 13930 | DNA polymerase V subunit UmuC | |||