Leuconostoc kimchii NKJ218 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Leuconostoc kimchii NKJ218 RM systems
Ref: Jung,J.Y. et al. unpublished
REBASE ref # 28648
| Sequence length: | GenBank #: | |
| Chromosome: | 1,917,647 bp | CP037939 |
| plasmid pLKN2: | 20,691 bp | CP037937 |
REBASE acronym: Lki218
Org_num: 34499
All begin EW139_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3210 | M1 family peptidase | |||
| 3215 | S | S.LgeKG16ORF1995P (73% identity) | S1.Lki218ORF3235P | |
| 3220 | R | LspC2ORF140P (99% identity) | Lki218ORF3235P | |
| 3225 | S | S2.LspC2ORF140P (61% identity) | S2.Lki218ORF3235P | |
| 3230 | GIY-YIG nuclease family protein | |||
| 3235 | M | M.LspC2ORF140P (100% identity) | M.Lki218ORF3235P | |
| 3240 | S | S3.Ctecb2ORF4295P (65% identity) | S3.Lki218ORF3235P | |
| 3245 | S | restriction endonuclease subunit S | S4.Lki218ORF3235P | |
| 3250 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5630 | BREX-1 system phosphatase PglZ type A | |||
| 5635 | RM | Lci37ORF4340P (57% identity) | Lki218ORF5635P | |
| 5640 | site-specific integrase | |||
| 5640 | site-specific integrase | |||
| 5645 | RM | Lci2700ORFBP (96% identity) | Lki218ORF5645P | |
| 5650 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8880 | 423 aa hypothetical protein | |||
| 8885 | R | LspC2ORF5445P (100% identity) | Lki218ORF8890P | |
| 8890 | M | M.LspC2ORF5445P (100% identity) | M.Lki218ORF8890P | |
| 8895 | 30S ribosomal protein S9 | |||
| plasmid pLKN2 | ||||
| 295 | 151 aa hypothetical protein | |||
| 300 | R | Lsa63ORF4450P (92% identity) | Lki218ORF305P | |
| 305 | M | M.Lsa63ORF4450P (88% identity) | M.Lki218ORF305P | |
| 310 | S | S.Lme6ORF10185P (79% identity) | S.Lki218ORF305P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1250 | sodium:proton antiporter | |||
| 1255 | R | LspC2MrrP (99% identity) | Lki218MrrP | |
| 1260 | response regulator transcription factor | |||