Nitrosococcus wardiae D1FHS |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Nitrosococcus wardiae D1FHS RM systems
Ref: Wang,L. et al. unpublished
REBASE ref # 28633
Complete sequence: 4,022,640 bp
GenBank #: CP038033
REBASE acronym: NwaD1FHS
Org_num: 34469
All begin E3U44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 530 | guanylate kinase | |||
| 535 | R | NhaNc4ORF751P (96% identity) | NwaD1FHSORF560P | |
| 540 | DUF262 domain-containing protein | |||
| 545 | DUF262 domain-containing protein | |||
| 550 | transcriptional regulator | |||
| 555 | S | S.MmoShm1ORF19910P (59% identity) | S.NwaD1FHSORF560P | |
| 560 | M | M.NhaNc4ORF751P (96% identity) | M.NwaD1FHSORF560P | |
| 565 | YicC family protein | |||
| 7290 | 283 aa hypothetical protein | |||
| 7295 | M | M.Csp2AORF23830P (87% identity) | M.NwaD1FHSORF7295P | |
| 7300 | S | S.AspNIH4IV (47% identity) | S.NwaD1FHSORF7295P | |
| 7305 | R | AprV6ORF3540P (91% identity) | NwaD1FHSORF7295P | |
| 7310 | ISL3 family transposase | |||
| 13770 | 69 aa hypothetical protein | |||
| 13775 | R | NhaNc4ORF1984P (97% identity) | NwaD1FHSORF13790P | |
| 13780 | Fic family protein | |||
| 13785 | S | S.RdeR5ORF16255P (38% identity) | S.NwaD1FHSORF13790P | |
| 13790 | M | M.NhaNc4ORF1984P (88% identity) | M.NwaD1FHSORF13790P | |
| 13795 | 96 aa hypothetical protein | |||
| 17485 | 378 aa hypothetical protein | |||
| 17490 | R | DdeGORF1861P (38% identity) | NwaD1FHSORF17515P | |
| 17495 | 61 aa hypothetical protein | |||
| 17500 | Zeta toxin family protein | |||
| 17505 | S | restriction endonuclease subunit S | S1.NwaD1FHSORF17515P | |
| 17510 | S | S.Bth59ORF798P (31% identity) | S2.NwaD1FHSORF17515P | |
| 17515 | M | M.Ppr5001ORF614P (90% identity) | M.NwaD1FHSORF17515P | |
| 17520 | 61 aa hypothetical protein | |||
| 18360 | DUF3223 domain-containing protein | |||
| 18365 | R | NhaNc4ORF1039P (92% identity) | NwaD1FHSORF18385P | |
| 18370 | 162 aa hypothetical protein | |||
| 18375 | DUF3800 domain-containing protein | |||
| 18380 | S | S.MsiT4MORF937P (40% identity) | S.NwaD1FHSORF18385P | |
| ??? | M | M.NhaNc4ORF1039P (83% identity) | M.NwaD1FHSORF18385P | |
| 18410 | bifunctional methylenetetrahydrofolate | |||
| 18700 | IS630 family transposase | |||
| 18705 | R | NocAORF1201P (59% identity) | NwaD1FHSORF18740P | |
| 18710 | S | S.MspRZ01ORFBP (51% identity) | S1.NwaD1FHSORF18740P | |
| 18715 | helix-turn-helix domain-containing protein | |||
| 18720 | IS630 family transposase | |||
| 18725 | S | restriction endonuclease | S2.NwaD1FHSORF18740P | |
| 18730 | nucleotidyltransferase | |||
| 18735 | DUF86 domain-containing protein | |||
| 18740 | M | M.NwaCORF1822P (91% identity) | M.NwaD1FHSORF18740P | |
| 18745 | DUF4102 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 80 | 82 aa hypothetical protein | |||
| 85 | M | M.NwaD1FHSORF19135P (100% identity) | M.NwaD1FHSORF85P | |
| 90 | 289 aa hypothetical protein | |||
| 1050 | ribonucleotide-diphosphate reductase subunit | |||
| 1055 | M | M.NhaNc4ORF645P (95% identity) | M.NwaD1FHSORF1055P | |
| 1060 | exosortase system-associated protein, TIGR04073 | |||
| 1705 | type II toxin-antitoxin system HicA family | |||
| 1710 | RM | Pae2014ORF11500P (51% identity) | NwaD1FHSORF1710P | |
| 1715 | BREX-1 system phosphatase PglZ type B | |||
| 4395 | DUF3780 domain-containing protein | |||
| 4400 | M | M.NocAORF546P (72% identity) | M.NwaD1FHSORF4400P | |
| 4405 | helicase | |||
| 10710 | MarR family transcriptional regulator | |||
| 10715 | M | M.RvaDORF1484P (60% identity) | M.NwaD1FHSORF10715P | |
| ??? | R | Mlo7ORF16500P (52% identity) | NwaD1FHSORF10715P | |
| 10730 | V | V.SbaRTA1ORF905P (59% identity) | V.NwaD1FHSORF10715P | |
| 10735 | 75 aa hypothetical protein | |||
| 10780 | 134 aa hypothetical protein | |||
| 10785 | M | M.PmeBin497ORFBP (44% identity) | M.NwaD1FHSORF10785P | |
| 10790 | 132 aa hypothetical protein | |||
| 19040 | 82 aa hypothetical protein | |||
| 19045 | M | M.NwaD1FHSORF85P (100% identity) | M.NwaD1FHSORF19045P | |
| 19050 | 289 aa hypothetical protein | |||
| 19130 | 82 aa hypothetical protein | |||
| 19135 | M | M.NwaD1FHSORF85P (100% identity) | M.NwaD1FHSORF19135P | |
| 19140 | 289 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7035 | 89 aa hypothetical protein | |||
| 7040 | M | M.NhaNc4DamP (96% identity) | M.NwaD1FHSORF7040P | |
| 7045 | thioredoxin-disulfide reductase | |||